| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1083 |
|---|
| Symbol | |
|---|
| ID | 3579149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1264185 |
|---|
| End bp | 1265102 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637684778 |
|---|
| Product | putative aldose-1-epimerase |
|---|
| Protein accession | YP_289144 |
|---|
| Protein GI | 72161487 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2017] Galactose mutarotase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.145719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGAAAA TGGCCGAGGG TTCGCATTCC GCTATCACGT TGGAAGCGGG AAAGTACCGC
GCCACAGTCG ACCCGCTCGG TGCCGCCCTG CGCACGCTGC ACTGGGGTGA GCGGGAACTC
GTCTGGGGAT ACCCGGAGGG CCGCCCCCAA CTCGCGCAGG GACAGATCCT CCTCCCCTGG
CCGAACCGGA TCGACCACGG TCGGTACTCC TTTGGCGGGA CCACCTACCA ACTGGAGATC
ACCGAACCGG AACTCGACAA CGCGATCCAT GGGCTGACCA GCACACTCCT GTGGCAGCCG
AGCCAGATCA CCGCGGACTC GGTCCGTTTC ACCCTTGCGT TCGACGGCGC GCCCGGCTAC
CCCTTCCGCA TGGAGTTCTG GGTGTGCTAC AGCCTCGACC CCGACCACGG GCTGCACGTC
CGCATCGGGG CGCAGAACAC GGGGGACGGC CCGGCACCCT ACGGCCACGG CAGCCACAAC
TACCTCACTC TGGGACTCCC GGTCGACGAG GTCACCCTGC AGCTTCCCGC CGCGGAATGG
CAGCCCGTCA ACGAGCGGAT GATCCCCACA GGACCGGTCC GCTCCGTGGC CGGCACCGAC
TACGACTTCC GCACTCCCCG GCAGGTCGGC CCCACCGTCT TGGACACGGC GTTCACCGGC
CTGCGCTTCG ACGAGGCGGG GCGTTCCTGG ACGGTGCTGA GCGCCGGGGA GCTGTGCGTC
GGCCTCTGGG CCGATGACAG CCACCCGTGG CTCCAAGTGT TCTCCGCCGA CTATCCCGGC
CCGGAACGCC GCCGCCATCT GGCTGTCGAA CCGATGACCT GCCCGCCCAA TGCGTTCGTC
ACCGGAACCG ACCTGATCGT GCTGGACCCG GGGCAGAGTA TCGAGTCGTC CTTCGGCATC
ACCTCTACCC CGGAGTGA
|
|---|
| Protein sequence | MQKMAEGSHS AITLEAGKYR ATVDPLGAAL RTLHWGEREL VWGYPEGRPQ LAQGQILLPW
PNRIDHGRYS FGGTTYQLEI TEPELDNAIH GLTSTLLWQP SQITADSVRF TLAFDGAPGY
PFRMEFWVCY SLDPDHGLHV RIGAQNTGDG PAPYGHGSHN YLTLGLPVDE VTLQLPAAEW
QPVNERMIPT GPVRSVAGTD YDFRTPRQVG PTVLDTAFTG LRFDEAGRSW TVLSAGELCV
GLWADDSHPW LQVFSADYPG PERRRHLAVE PMTCPPNAFV TGTDLIVLDP GQSIESSFGI
TSTPE
|
|---|
| |