Gene Tfu_1078 details

Gene Information

• Locus tag: Tfu_1078
• ID: 3579144
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 1260296
• End bp: 1260913
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637684773
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_289139
• Protein GI: 72161482
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCACCG GCATCGTTGA AGAACTCGGC ACGGTTGTCG AGGTCACCCC GGTGGGATCG 
GATTCCGCGG ATGCGATCCG GCTCACCATC CACGGTCCTG ACGTCACCTC AGACGCGTCT 
CCCGGCGATT CCATCGCGGT CAACGGGGTC TGCCTGACCG TGACCGAACT GGCCGACGGC 
CGGTTCAGCG CCGACGTGAT GAAGGAGACC CTGGACCGCT CCAACTTGGG CGCGCTCACC 
GTCGGCTCCC CGGTGAACCT GGAACGCGCC CTCAAAGTCT CCTCCCGGCT CGGCGGCCAC 
ATCGTCCAAG GGCACGTGGA CGGCACCGGC GTCGTCACCG AGCGGGTTCC CGGCACGGAC 
TGGGAAACCG TCACCTTCTC CCTGCCCGCC CGCCTGTCCC GCTACGTGGT GGAAAAAGGG 
TCCATCGCCG TGGACGGGGT GAGCCTCACC GTTGCCGCCT GCACCGACTC CTCGTTCACG 
GTCAGCCTGA TCCCTACCAC GCTGCAAGCC ACCACCCTCG GGTTCGCCAC GGTAGGCACG 
AAAGTCAACA TCGAGGTCGA CACCCTGGCC AAATACGTGG AGCGCCTGCT GGGCGACCGG 
GTGGGCGGTA TCCGATGA 

 

Protein sequence

MFTGIVEELG TVVEVTPVGS DSADAIRLTI HGPDVTSDAS PGDSIAVNGV CLTVTELADG 
RFSADVMKET LDRSNLGALT VGSPVNLERA LKVSSRLGGH IVQGHVDGTG VVTERVPGTD 
WETVTFSLPA RLSRYVVEKG SIAVDGVSLT VAACTDSSFT VSLIPTTLQA TTLGFATVGT 
KVNIEVDTLA KYVERLLGDR VGGIR