Gene Tfu_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1077 
Symbol 
ID3580069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp1259173 
End bp1259841 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content70% 
IMG OID637684772 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_289138 
Protein GI72161481 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0368632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAATCC AGATCTCACC CAGCATCCTT TCCGCCGACT TCGCGCGCCT GGCCGACGAA 
GTCGAGGCCG TCGCCGGTGC CGCCGACTGG CTGCACGTCG ACGTCATGGA CAACCATTTC 
GTGCCCAACC TGACCTTGGG CCTGCCCGTC GTGGAGTCCT TGCTCAAGGT GGCGCCGCTG 
CCGTTGGACT GCCATCTGAT GATCGAGGAC CCGGACCGGT GGGCCCCGGC CTACGCCGAA 
GTGGGCGCGC AGAGCGTCAC CATCCACGCC GAAGCCGCCA AGGCGCCGGT ACGCACGCTC 
CGGGCGATCC GTGCGGCCGG GGCCCGCGCC GGGCTGGCAC TCAACCCCGC CACCCCGGTC 
GACGGGTACG CCGACCTCCT GGGTGAGATC GACATGCTGC TGGTCATGAC GGTCGAACCC 
GGTTTCGGCG GCCAGAAGTT CCTCGACCTC GTGCTGCCGA AGATCCGCCG CGCCCGCGAA 
CTCATCCGCA ACGCCGACGC TTCGGTGTGG CTCCAGGTCG ACGGCGGAGT GAGCGCGGAG 
ACGATCGAAC GGTGCGCGGA AGCCGGGGCC GACGTCTTCG TGGCAGGCTC CGCGGTCTAC 
GGCGAAAAAG ACCCGGCGGC CGCCGTCGAG CACCTGCGCG CCCTCGCAGA GCGGGCCACC 
GCCCGCTAG
 
Protein sequence
MAIQISPSIL SADFARLADE VEAVAGAADW LHVDVMDNHF VPNLTLGLPV VESLLKVAPL 
PLDCHLMIED PDRWAPAYAE VGAQSVTIHA EAAKAPVRTL RAIRAAGARA GLALNPATPV 
DGYADLLGEI DMLLVMTVEP GFGGQKFLDL VLPKIRRARE LIRNADASVW LQVDGGVSAE 
TIERCAEAGA DVFVAGSAVY GEKDPAAAVE HLRALAERAT AR