Gene Tfu_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0949 
Symbol 
ID3579190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp1117898 
End bp1118470 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content71% 
IMG OID637684644 
ProductTetR family transcriptional regulator 
Protein accessionYP_289010 
Protein GI72161353 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0189696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTACCC GCGGGGGAGA CCGTCGGGCA GCGATCCTGC GTGCGGCCGC TGAGCTGTTC 
GCCGCCCGTG GTTTTCGCAG CGTGTCCATC GAGGACTTGG GACGCGCTGT CGGCACGACC 
GGTCCCGCGC TCTACCGCCA TTTCCCCGGC AAGGAAGCGC TGCTGGCGGA GGTGCTGCTC 
GACATCAGCG AACGGCTGCT GCGCCAGGGC ACCGAGCACG TGGCCGCCCA CCCGGATCCG 
AACGACGCGT TGGATGCGCT GCTCCGCGGC CATATCGCTT TCGCACTGGC CGAACCGGCG 
CTCATCACGG TGCACGACCG GGAACTGCTG CACGTGCCCG AAGAGCCGCG CCGGAAGATC 
CGCCGCCTCC AGCGCGCCTA CCTGGAACAG TGGGTGGACG TCCTGGCCGC GGTGCGTCCC 
ACCACCCCCA CGCCGGTGCT GCGCACCGCG GTGCACGCCA CGTTCGGCCT GCTCAACTCG 
ACCCCGCACA GCGCGGGGGA ACTGGACCGG GACCATCTGG CCGAGCTGCT GTTCACGATG 
GCCCGCACGG CACTGCTCGC CGCGGGGAAG TAG
 
Protein sequence
MRTRGGDRRA AILRAAAELF AARGFRSVSI EDLGRAVGTT GPALYRHFPG KEALLAEVLL 
DISERLLRQG TEHVAAHPDP NDALDALLRG HIAFALAEPA LITVHDRELL HVPEEPRRKI 
RRLQRAYLEQ WVDVLAAVRP TTPTPVLRTA VHATFGLLNS TPHSAGELDR DHLAELLFTM 
ARTALLAAGK