| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0902 |
|---|
| Symbol | |
|---|
| ID | 3579202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1064369 |
|---|
| End bp | 1065001 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637684597 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_288963 |
|---|
| Protein GI | 72161306 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGACA CCTGGACCGC TATCGACTTC GAGACCGCCA ACCGCAACCA GGGCAGCGTG
TGCGCGGTGG GACTCGTGCG AGTCACCGAC GGGCGGATCG TCGACCGCTA CACCACCCTG
GTCCGTCCCC CGGCCCCCGT CGACCACTTC GAGCAGGACA ACATCGCGGT CCACGGGATC
ACCCCCGAGC ACGTCGCCGA CGCCCCCGCT TGGCCGCAGG TCCACACGAC CATCCTGGAA
TTCGCCGCGG GCAGCCCGTT CGTCGCGCAC AACGCAGTGT TCGACATGGG CGTGATCCGC
GCTGCCTGCG CGCACGCCGG CCTCCCCGAG CCCTCGCTCC ACTACGCGTG CTCCTTGGAC
ATCGCCCGGC GGACGTGGCC CGCCCTGCGG AACCACCGGC TGCCCACGGT CTGCCGCACG
ATCGGCTACG ACCTGCGCCG CCACCACACC GCGGACGCCG ACGCGGAAGC CGCCGCCCAC
GTCGTGCTCG CCGCACTCCG GCACCACGGG GCCGCCACCC TGGTCGAACT GTGCCAGCGG
CTCCGCCGTC CGCTGCGGCG CACCCCCGCG CGTCCGGCAC CGCAGCACTG CGCCCCGCAA
CCGCTGTGGT CCGAGGCCGG ATTCAGCGAA TAA
|
|---|
| Protein sequence | MHDTWTAIDF ETANRNQGSV CAVGLVRVTD GRIVDRYTTL VRPPAPVDHF EQDNIAVHGI
TPEHVADAPA WPQVHTTILE FAAGSPFVAH NAVFDMGVIR AACAHAGLPE PSLHYACSLD
IARRTWPALR NHRLPTVCRT IGYDLRRHHT ADADAEAAAH VVLAALRHHG AATLVELCQR
LRRPLRRTPA RPAPQHCAPQ PLWSEAGFSE
|
|---|
| |