| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0758 |
|---|
| Symbol | |
|---|
| ID | 3579366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 896658 |
|---|
| End bp | 899141 |
|---|
| Gene Length | 2484 bp |
|---|
| Protein Length | 827 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637684451 |
|---|
| Product | regulatory protein, LuxR |
|---|
| Protein accession | YP_288819 |
|---|
| Protein GI | 72161162 |
|---|
| COG category | [K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG3903] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCGC CACGACAGCA CCTGCCCGCT CCCCGCACCC CGTTCATCGG CCGAGAACGC
GACGTCGCCG ATCTGATCAG CCTGCTGCAC ACCGTGCGCA TGGTGACGCT CACCGGCTCC
GGCGGTATCG GCAAGACCCG CCTGGCGCTA CGCGTCGCCG AACAGGAGCG CAGCCGGTTC
GCCGACGGAA TGCTCTTCGT CGACCTGAGT GCGGCCACCG CCGGCGACCA CGTGCTGTAC
TCGATCGCCC AGGCTCTGGG CATCGAGACC GCTCGCGGCC AGTCACTCCA CGAAGCCGTG
CTGCTGGCCC TCCGCTCCTG TGAACTGCTG CTGGTCTTGG ACACCTGCGA CCGCATCGTG
GCCCCGCTGG CTGACCTCTG CCGCAGCCTC CTGCGCACCT GCCCCCGGCT GCGGCTGCTC
GCCACCAGCC GGGAGCCGCT GCGCATCCCC GGGGAGAACG TCTGGCGGGT TCCTCCGCTC
GACCTTCCCC CCGCTCCCCC AAAAGCACCG GTCAGCGTCC CTTGGTCCCC CCCTTCCCCG
GGACGGTTGA GCGTCCACGA AGCGATGCGC TCCCCAGCGG TCCGCTTGTT CGCCGCGCGT
GCCCACCAGG CACGCCCGGG GTTCACCATC ACCCCCGAAA CCGTCGACAC AGTCGTGCAG
ATCTGCCGCA TCCTCGACGG GGTGCCCCTC GCTATCGAAC TGGCCGCGGC CCGCGTCCAG
GTGCTGTCAG TCGAACAGAT CCTGCAACGC CTCGACGACC GTTTCACCCT GCTCAACAGC
ACGGACCAGC AGCTCCCGGA ACGGCAGCGC ACCATGCGGG CCGTGGTGGA GTGGAGCCAC
GCCCTGCTCA CCGACGCGGA GAAAGCCCTG CTCCGCCGCC TGTCGATCTT CACGAACTGG
TCGCTCGACA TGGCGGAGGC CCTCTTTACC GCCGACTTCG GGGACAACCT GCTGCAACTG
CACGCCTCGC TGCTGGACAA GTCGCTGATC GTGCTGGAAG ACGAGGTAGA GGGCATCGCC
TACTACCGCA TCCTCGACAG CGTCCGCGTC TACGCCGCCG AGAAACTGCA GGCCGCGGGG
GAAACCGAGC ACTATCTGCG GCGCGCCCTC GAACAGGGGG TGCACTGGGC CGGGGAGTTC
GCGTCCGCGA TGGGCGAAGA CCTGCCCTGG CAGGAGCGGC TGAAACTCCT GAACCGGGTG
GAGCGCAACC TGGACAACAT GCGCTCCTTC CTGCACCGGG CCGCCACTGG CGACCTCGTA
GAGCCCGGAC TGCAGGTCTG CGTCCTCCTG CGGTCCTACT GGCTCGCATT CGACCGGTGC
GCGGAAGGCG CCGCCTTCCT GTCCGCCCTG CTGGCCGCGG CCCCCGACCA GCTGCCCACG
CCGCTCCGGA CCCGCGCCCT GGTCCTGTAC GGCGAACTGA CCTTGGACCT CGACGGCGAC
CAGATCGTCC ACGAACGGCT CACCACCGGG CTCCGCTTGG CGGAGTCGCT CGGCGACGAC
ACTGCCCGCG CCCACGCCCT GGCTGCCCTG GCGGTCCTCG CGCTCCGCCA GGAAGAGTTC
TCGACGGGCA TCGCCCACGC CACGGAATCC CTGGAGTTGG CGCGACGCCT CGGCGACCGG
CTCCTCGAAG TCCACGTCAT GGGGGTGCGG AGCCGCCTGG CTGAGGCGGC AGGCGATGTC
GACGACGCCC AGCAGTGGCT GTCGCGGACC TTGGCGTTGA GCGAGCAGAC CGGCTGCGGC
TGGGCCCTGG CCTACTGCCA CGAGTCGCTG AGCGCCCAGG CGCTCCGGGA AGGCGCCTCT
CAGCAGGCTG AAGAGCACCT GCACCGTGCC CTCACCCTGT TCTCCGAGCT GGGATCGGCG
CTGGGTGCTG CGCGGTGCCT CTCAGCGCTG GGCCGTCTCG CCGCGCAGCG CGGGCAGTCG
CAGACCGCCT GGGAGCACTT GAGCGGGGCT GTCCGCCGCA GCAGGCTGTC GGGGCGGCGG
CTGACTCTGG CCCGCGCAAT GGAGGACCTG GCCTGGTTCG CGGCCTCAAA GAACATGACC
GACCGGGTTG TGCTCCTCGG CGCGCAGGCG GAAATGCTGC GCCAGTGGGC CCACGCCCCT
TCCCCAGGCA GTCAGCGGTT GCGCGAGCAC GTTGCCCGAC AGTGGGGGGA CGCGTCCGCA
GCCGCAGCCT GGACCCGGGC CCGCACCCTG CCCCTCGAAG AAGCGCTGGA TGCCGCGCTC
GCCGCCCCCC ATTTCGGAGA TGTGCGCACA CTCACCCCGC GGGAGCGTCA GATCGCCCGA
CTCGCGGGTT CGGGACTGTC CAACCGGGAG ATCGCAGCCC GGCTGGTGAT CAGCCAGGCA
ACCGTGGCGC GGCATATCGC CAACATCTTC GCCAAACTGA ACATCTCCAA ACGCGCTGAA
TTGCCCGCTC GGCTTGCCGC ACTCCGGAAA ACTCAGACAG ACGGACACCC GCAATCGGCG
GACACTTCCC CGTGCCGGTC GTGA
|
|---|
| Protein sequence | MPAPRQHLPA PRTPFIGRER DVADLISLLH TVRMVTLTGS GGIGKTRLAL RVAEQERSRF
ADGMLFVDLS AATAGDHVLY SIAQALGIET ARGQSLHEAV LLALRSCELL LVLDTCDRIV
APLADLCRSL LRTCPRLRLL ATSREPLRIP GENVWRVPPL DLPPAPPKAP VSVPWSPPSP
GRLSVHEAMR SPAVRLFAAR AHQARPGFTI TPETVDTVVQ ICRILDGVPL AIELAAARVQ
VLSVEQILQR LDDRFTLLNS TDQQLPERQR TMRAVVEWSH ALLTDAEKAL LRRLSIFTNW
SLDMAEALFT ADFGDNLLQL HASLLDKSLI VLEDEVEGIA YYRILDSVRV YAAEKLQAAG
ETEHYLRRAL EQGVHWAGEF ASAMGEDLPW QERLKLLNRV ERNLDNMRSF LHRAATGDLV
EPGLQVCVLL RSYWLAFDRC AEGAAFLSAL LAAAPDQLPT PLRTRALVLY GELTLDLDGD
QIVHERLTTG LRLAESLGDD TARAHALAAL AVLALRQEEF STGIAHATES LELARRLGDR
LLEVHVMGVR SRLAEAAGDV DDAQQWLSRT LALSEQTGCG WALAYCHESL SAQALREGAS
QQAEEHLHRA LTLFSELGSA LGAARCLSAL GRLAAQRGQS QTAWEHLSGA VRRSRLSGRR
LTLARAMEDL AWFAASKNMT DRVVLLGAQA EMLRQWAHAP SPGSQRLREH VARQWGDASA
AAAWTRARTL PLEEALDAAL AAPHFGDVRT LTPRERQIAR LAGSGLSNRE IAARLVISQA
TVARHIANIF AKLNISKRAE LPARLAALRK TQTDGHPQSA DTSPCRS
|
|---|
| |