Gene Tfu_0753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0753 
Symbol 
ID3579361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp889447 
End bp890811 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content67% 
IMG OID637684446 
Productputative ABC transporter periplasmic substrate-binding protein 
Protein accessionYP_288814 
Protein GI72161157 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0836002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGAGGA TAGCGGCCGC GGCGGCAGCG CTGGCCGTAC TGGCGGCGGC CGCATGCGAG 
GTGGAGGAGG ACCGGATCAT CTACCTGGCG ACCGGCCGGG ACGTCAGCGG CAACAACCTC
TACCTCAGTC TCATCCAGGA GTGGAACAGA GCCCACCAGA AGGAGGGCTA CCGCGCCTAC
CTCGTGGAAC TGCCGGGGAG CGCCGATGAG CAGTACGCGG AGATGGTCCG CGACGCCCAG
AGCGGCAGCC CCGAGTACGA CATCATCAAC ATTGACAACC AGTTCATCGC CATGTTCGCC
GAGGCCGGGT GGATCAAAGA GATCGGCCCT GGCTGGGCAG AGGCCAACGG GTTCCCTGAC
GCGGACGGCA CCGCCCTGCT GGAAGGGACG TTCCGGGAGA AGCTGATCCG GTCGGTGACC
TACGAGGATG AGGCCTACGC GGTCCCCTTC ACCGCGGACG TGGGCATGCT CTACTACCGC
CGGGACCTGG TCGGCCAGGG GTCGCTGACC GCGGGGCGCA CGTTCCACGA GATCCTCGCA
GAGCTCGCGG ACGCCGCGGA AGGCACCGAC GTCGACCACC TCTACATCGG GCAGTTCGCC
CAGTACGAGG GGTTCATGGT CAACACGATG GAGATCGTCG CCGGGGAGCA GGGGAGGCTC
ATCGTCCCCG GTGAGCAGCG CCTCGCCGAC ATCCACCGCA ACGGGGCGGA ACACCAGGCG
CTCAACCTCA TCGCAGCCAG TTTCGAGGAC GGCACCTTCC ACCCTGCCGC GTTGGACAGC
AACGAAGAGG AGGCATACGT CCGCTTCCTC AGCGGGGAGA CGGTGGCGAT GCGCAACTGG
CCGATCTGGT ACCGCCGACT GCTCATCGCG TCCACGGAGA ACGACTCCGG GCATGCCTCC
GAGTACGCGG TGGAGGCCCT GCCCGGAGCG GTCCTAGGCG GGCAGAGTCT CGCGCTGGCA
GCGGAAACCC CCCACGAGGA AGCCGCGCTC GACCTCATCC GCTTCCTCAC CGGGGAGGAA
CAGCAGCAGC TTCTGTTCTA CTGCGGCGGG TACGCCCCCA CCCGCCAGGA CATCTACGTG
AACAAGCTGT CCCCGGAACA GGCCGCGCAG TTGTGCGCCT CCTACGAGAT CACAGGGGAG
GACGCCTGGC ACAACCAGGC CAACCAGCTC TTGGACACGA TCCGACTGGC GATCGACGAC
GCCCAGCTCC GGCCGGTCAC CCCCTACTAT TCGCAGTTCA GCGAGGAGGT CTTCTCCGGT
CTGCACCCGA TGTTCGCGGA CGCGCTCCAC GGCGCGGTCC CGCTCGATGC CAAGCGGTTG
GCGCAGGTGT ATACGGCGGC GGACAGGGCG CTTGACGGGA GCTGA
 
Protein sequence
MRRIAAAAAA LAVLAAAACE VEEDRIIYLA TGRDVSGNNL YLSLIQEWNR AHQKEGYRAY 
LVELPGSADE QYAEMVRDAQ SGSPEYDIIN IDNQFIAMFA EAGWIKEIGP GWAEANGFPD
ADGTALLEGT FREKLIRSVT YEDEAYAVPF TADVGMLYYR RDLVGQGSLT AGRTFHEILA
ELADAAEGTD VDHLYIGQFA QYEGFMVNTM EIVAGEQGRL IVPGEQRLAD IHRNGAEHQA
LNLIAASFED GTFHPAALDS NEEEAYVRFL SGETVAMRNW PIWYRRLLIA STENDSGHAS
EYAVEALPGA VLGGQSLALA AETPHEEAAL DLIRFLTGEE QQQLLFYCGG YAPTRQDIYV
NKLSPEQAAQ LCASYEITGE DAWHNQANQL LDTIRLAIDD AQLRPVTPYY SQFSEEVFSG
LHPMFADALH GAVPLDAKRL AQVYTAADRA LDGS