Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0753 |
Symbol | |
ID | 3579361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 889447 |
End bp | 890811 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637684446 |
Product | putative ABC transporter periplasmic substrate-binding protein |
Protein accession | YP_288814 |
Protein GI | 72161157 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0836002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGAGGA TAGCGGCCGC GGCGGCAGCG CTGGCCGTAC TGGCGGCGGC CGCATGCGAG GTGGAGGAGG ACCGGATCAT CTACCTGGCG ACCGGCCGGG ACGTCAGCGG CAACAACCTC TACCTCAGTC TCATCCAGGA GTGGAACAGA GCCCACCAGA AGGAGGGCTA CCGCGCCTAC CTCGTGGAAC TGCCGGGGAG CGCCGATGAG CAGTACGCGG AGATGGTCCG CGACGCCCAG AGCGGCAGCC CCGAGTACGA CATCATCAAC ATTGACAACC AGTTCATCGC CATGTTCGCC GAGGCCGGGT GGATCAAAGA GATCGGCCCT GGCTGGGCAG AGGCCAACGG GTTCCCTGAC GCGGACGGCA CCGCCCTGCT GGAAGGGACG TTCCGGGAGA AGCTGATCCG GTCGGTGACC TACGAGGATG AGGCCTACGC GGTCCCCTTC ACCGCGGACG TGGGCATGCT CTACTACCGC CGGGACCTGG TCGGCCAGGG GTCGCTGACC GCGGGGCGCA CGTTCCACGA GATCCTCGCA GAGCTCGCGG ACGCCGCGGA AGGCACCGAC GTCGACCACC TCTACATCGG GCAGTTCGCC CAGTACGAGG GGTTCATGGT CAACACGATG GAGATCGTCG CCGGGGAGCA GGGGAGGCTC ATCGTCCCCG GTGAGCAGCG CCTCGCCGAC ATCCACCGCA ACGGGGCGGA ACACCAGGCG CTCAACCTCA TCGCAGCCAG TTTCGAGGAC GGCACCTTCC ACCCTGCCGC GTTGGACAGC AACGAAGAGG AGGCATACGT CCGCTTCCTC AGCGGGGAGA CGGTGGCGAT GCGCAACTGG CCGATCTGGT ACCGCCGACT GCTCATCGCG TCCACGGAGA ACGACTCCGG GCATGCCTCC GAGTACGCGG TGGAGGCCCT GCCCGGAGCG GTCCTAGGCG GGCAGAGTCT CGCGCTGGCA GCGGAAACCC CCCACGAGGA AGCCGCGCTC GACCTCATCC GCTTCCTCAC CGGGGAGGAA CAGCAGCAGC TTCTGTTCTA CTGCGGCGGG TACGCCCCCA CCCGCCAGGA CATCTACGTG AACAAGCTGT CCCCGGAACA GGCCGCGCAG TTGTGCGCCT CCTACGAGAT CACAGGGGAG GACGCCTGGC ACAACCAGGC CAACCAGCTC TTGGACACGA TCCGACTGGC GATCGACGAC GCCCAGCTCC GGCCGGTCAC CCCCTACTAT TCGCAGTTCA GCGAGGAGGT CTTCTCCGGT CTGCACCCGA TGTTCGCGGA CGCGCTCCAC GGCGCGGTCC CGCTCGATGC CAAGCGGTTG GCGCAGGTGT ATACGGCGGC GGACAGGGCG CTTGACGGGA GCTGA
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Protein sequence | MRRIAAAAAA LAVLAAAACE VEEDRIIYLA TGRDVSGNNL YLSLIQEWNR AHQKEGYRAY LVELPGSADE QYAEMVRDAQ SGSPEYDIIN IDNQFIAMFA EAGWIKEIGP GWAEANGFPD ADGTALLEGT FREKLIRSVT YEDEAYAVPF TADVGMLYYR RDLVGQGSLT AGRTFHEILA ELADAAEGTD VDHLYIGQFA QYEGFMVNTM EIVAGEQGRL IVPGEQRLAD IHRNGAEHQA LNLIAASFED GTFHPAALDS NEEEAYVRFL SGETVAMRNW PIWYRRLLIA STENDSGHAS EYAVEALPGA VLGGQSLALA AETPHEEAAL DLIRFLTGEE QQQLLFYCGG YAPTRQDIYV NKLSPEQAAQ LCASYEITGE DAWHNQANQL LDTIRLAIDD AQLRPVTPYY SQFSEEVFSG LHPMFADALH GAVPLDAKRL AQVYTAADRA LDGS
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