| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0725 |
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| Symbol | |
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| ID | 3581999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 850533 |
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| End bp | 853382 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637684418 |
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| Product | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal |
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| Protein accession | YP_288786 |
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| Protein GI | 72161129 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCCTG CCGCTGCCGC GGCTTTTGCA CCCGGTTCTC TCGTGGCAGG ACGCGGACGG
GAATGGGTGG TGCTGCCCTC TACCGAGGAG GACTTTGTGC TGGTCCGTCC CCTCAACGGG
GACGAGGCTT TCACCACGCT GCTGTACCGA GACGAGGTGA CGCCCGCAGA GTTTCCCGCC
CCGTCCACGG AACTGTCCCA GATCGGGGAC CATGTTTCCG CGTCTCTGCT GCGCACCGCG
ATGCGGGTGG GGTGCACGTC CCCCGCGCTT CCGCTCCGGT GTTTAGGGTC GATCCGCGTG
CAGCCGCGCC GCTACCAGTT CGTGCCGCTG CTGTTGGCGT TGCGCATGGA GACGGTTCGG
CTGCTCATCG CGGACGATGT CGGGACCGGG AAAACGGTTG AGGCCGCGCT GATCGCTAAA
GAACTAGTGG AGCGGGGGGA GGCACGGCGT ATGGCGGTGG TGTGTCCCCC GGCGCTGGCC
GAACAGTGGC AGGCAGAGTT GCGGGACAAG TTCGGTATCG AAGCCGAACT GGTTCTCCCC
TCGACTGTGC GCTGCCTGGA ACGTCCGCTG CGCGCCGACC AATCGGTGTT CAAGACGTAC
CCGTACACGA TCGTCTCCAC CGACTTCATC ACCTCTGAGC AGCGTCGCGC CCAGTTCCTC
ACCCACTGCC CTGACCTGGT GATCGTGGAC GAGGCGCACA CGTGGGTGAA TGCTTCGCCC
ACGAGGCTGC GCCAGCAGCG TCAGGAACTG CTACGGAACG TGGCCGCACA GCAGGACCGC
CATCTGATCC TGGTTACCGC CACCCCGCAC AGCGGGAGGG AGAACGCGTT CCACGACCTG
CTGGGCATGC TCACCCCAGA ACTCGCCGAG GCGGATTGTC GAAGCCGGCG AGGGCGGGCA
CTCCTGGCCC GTCATTGTGT GCGGCGTCAC CGCCGCGACA TCCAGCGGTT CCTCGACCAG
GAGACAGTTT TCCCGCAAGG ACGCGAGTTC CGGGACGAAA AGTACGAGTG GAGCCCGGCC
TACGCTGAGT TCAACGCCGA AGTGCTGGCG TATGCGCGGG AAGCGGCTGC TGACCCCAGC
GGCACCAAGC TGCAGCAGCG GGTGCGCTGG TGGTCGGCGT TGGCGCTGCT CCGGTCGGTG
GTTTCGTCCC CGGCGGCCGC AGCCGCAGCG CTCCGCACCC GGTCGACAAC ATTCTCGGCG
GCGCGCAGTG CGGCTGACGT CGACGCGCTC GCCCGCGAGT CGGTGTATGA CGCAGACAGT
GCCGCCACAG AGGGCGGGGA CGCGGTCCCC GGCGCGGCAG TCGACCCCGA CACCTTGCCG
GAGAGCACCC GGAGACGCCT GCGCGCGCTA GCGGAACGGG CCGAGAAACT CCAGGGCGTG
GAGCACGACG CTAAGCTGCG GGCGCTGATC GCCACGGTCA AAGGTCTGCT CGCCGACGGC
TGCGACCCGG TCGTGTTCTG CCGGTACATT CCCACCGCCC ACTATGTCGC TGAAGAGTTG
CGGCAGGCGT TGCCGAAGAA CTGCGCAGTG GAGGCGGTCA CCAGTGAGCT TCCCCCACGC
GAGCGGGAGG ACCGTGTCGC ACACCTCGCG GCAACGGACC GCCGACGCGT GCTGGTGGCC
ACGGACTGCC TGTCCGAGGG TGTCAACCTG CACGAGCTTT TCCCCGCGGT CGTCCACTAC
GACATGGCGT GGAATCCGGT CCGGCACGAG CAGCGGGAAG GCCGGGTAGA CCGGTTCGGG
CAGCGGGCGA AACGGGTGCG CGTCGTCACG CTTTACGGGG CTGACAACGG TATCGACGGC
CCTGTGCGGG ACGTGCTGCT CCGGAAGCAC CGCACAATCA CGGCGCAGGC GGGGGGTGCG
GTCCCGGTGC CGACGTCCAG CGAATCGGTG CTGCAGGCGC TCGCGGAAAG CCTCCTGCTG
TGCGGTCCAC ACCCCCAGCT CGGCCGCACC CCCGGTCTTG CTGAGGCCAG CGCTGTGCTG
CACCGCGAAA GGGAACTGGT GTCGGAGCCT GCACCGCACC AGGGCGCAAC GTTCGCGCCC
TCCACCGGGG ACGTCCCGGA TGTGGTGGAA CATCTGGAGC GTCTCATCCC CGCCATCGAC
GACGAACTGG GCCGTCCCCG CGATATCGCT TCCTTTGTGG CACGCGTGTT CACGAGGCTG
GGAGTGCCAG TCCACGCCGA TGCCGGGAAG CTCACCGTGC CCCCTCAGTC GCTGCCGCCG
GGGGTGCGCG CTGCCCTGGG GGTCGCTGAC ACCGCCCACC AGGATCTGGT GTTCCGGCGT
GACCTGCCTG CCGGGCCGCA CGAGCACGTG CTGGTGCGCA CTGATCCAGC GGTGCGCGCG
TTAGCCCGCT ACGTGGTGGA GACCGCGTTC GAACCGGATC CGGGAACGCG TCCTGTCGTG
CAACGCTGCG GGGTGACGTG GACCGGCCGC GTAACTGTCC GCACCGTGCT GCTGCTGGTG
CGCTACCGGT TTCTGCTCAC CCTGCCTGGG GTGGACGGGC CGCGCACTGT GGTGGTGGAG
GAGGCTCGTA TTCGCGGCTA CCGGGCGGGG GCCCACGGAC GCGAGTGGCT TACCGACGCT
GAGACTGCGG CACTCGTAGA CACTCCCCCT GACGCTGATC TGCCACCGGA ACTAGTGCAG
TGCCACGCTC GGCGCGCCGT TGCGGAGCTT GACGAAATCC GCGGCGACCT CGCCGAGTGG
GGGGTGGTGC GCGCCGAACA GCTCCGCCAC GCCCACTACG GCATCCGCGC GTCTGCTGGG
TCCCGTGGCC AAGGACTGGC ACTCGTCCCC CATGGCCGTG CCGACGTGGT TGGCGTGTAC
GTCTACCTTC CGCTGGGGGA CGCCCCGTGA
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| Protein sequence | MSPAAAAAFA PGSLVAGRGR EWVVLPSTEE DFVLVRPLNG DEAFTTLLYR DEVTPAEFPA
PSTELSQIGD HVSASLLRTA MRVGCTSPAL PLRCLGSIRV QPRRYQFVPL LLALRMETVR
LLIADDVGTG KTVEAALIAK ELVERGEARR MAVVCPPALA EQWQAELRDK FGIEAELVLP
STVRCLERPL RADQSVFKTY PYTIVSTDFI TSEQRRAQFL THCPDLVIVD EAHTWVNASP
TRLRQQRQEL LRNVAAQQDR HLILVTATPH SGRENAFHDL LGMLTPELAE ADCRSRRGRA
LLARHCVRRH RRDIQRFLDQ ETVFPQGREF RDEKYEWSPA YAEFNAEVLA YAREAAADPS
GTKLQQRVRW WSALALLRSV VSSPAAAAAA LRTRSTTFSA ARSAADVDAL ARESVYDADS
AATEGGDAVP GAAVDPDTLP ESTRRRLRAL AERAEKLQGV EHDAKLRALI ATVKGLLADG
CDPVVFCRYI PTAHYVAEEL RQALPKNCAV EAVTSELPPR EREDRVAHLA ATDRRRVLVA
TDCLSEGVNL HELFPAVVHY DMAWNPVRHE QREGRVDRFG QRAKRVRVVT LYGADNGIDG
PVRDVLLRKH RTITAQAGGA VPVPTSSESV LQALAESLLL CGPHPQLGRT PGLAEASAVL
HRERELVSEP APHQGATFAP STGDVPDVVE HLERLIPAID DELGRPRDIA SFVARVFTRL
GVPVHADAGK LTVPPQSLPP GVRAALGVAD TAHQDLVFRR DLPAGPHEHV LVRTDPAVRA
LARYVVETAF EPDPGTRPVV QRCGVTWTGR VTVRTVLLLV RYRFLLTLPG VDGPRTVVVE
EARIRGYRAG AHGREWLTDA ETAALVDTPP DADLPPELVQ CHARRAVAEL DEIRGDLAEW
GVVRAEQLRH AHYGIRASAG SRGQGLALVP HGRADVVGVY VYLPLGDAP
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