| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0691 |
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| Symbol | |
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| ID | 3580534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 796201 |
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| End bp | 797661 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637684384 |
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| Product | helix-turn-helix, Fis-type |
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| Protein accession | YP_288752 |
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| Protein GI | 72161095 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.819144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCCTT CTCTCGGAGC AATCCTGCGC ACTCCCCGGC TGCAGTTACG GCTGCTCCAC
GGCACCGACA AACTCGACAC CCCGGTGCGC TGGGTGGCGG TCAGCGAACT CACCGACCCC
ACCCCCTACT TGGAGGGCGG AGAGCTCCTG CTGACCACGG GGATGCGGTG GACGCACGAG
ATGGTGGACG CCCGCGCCTA CGTCCAACGC CTCGTGGACC GCGGGGTCGC GGGCCTGGGG
TTCGGAATCG GGGTGGTCCA CGAGCAGGTG CCGTCGACCC TGGTGGACGC GGTCGCCGAA
TACGGGCTGC CGCTGATCGC GGTGCCCCGC CCCACCCCGT TCATCGCCAT CGGCAAAGAG
GTCTCCCGCA TGCTGGCGCG GGAAGAGTAC GAAGGGCTGA CGAAGGCGTT CGCCGCGCAG
CGCCAGTTGA CGCGGGCCGC TCTGCAGGGC GCAGAAGCGG TGGTGGACCG GCTCGGCGCG
GAGCTGCCCG AAGGGTGGGT GCTGCTGTTG GCCCCGGACG GCTCCCCCCT GCACGCCCGG
CCCGCGCAGG CCGCGTCCCA TGCGGCCGGA CTCGCCGGGG AGCTGCGCCG CCTGCAGGAG
CTGCGCCAAC CCGCCAGCGT CTCCCTGTCC GCGGATTCCC GGCACATCAC TGTCCAACCG
CTGGGCGTGG CGGGACGGGT CCGCGGGTTC CTGGCCGTGG GGGCGCCCCG CGCACTCGGC
ACTGAGGAGC GCACCCTGCT CAACGCGGCC AGCTCCCTGC TGTCGCTGGA ATTGGAGCGC
GGCGATTCCG CGGTCACCGA CCGGCTGCGC GGCGGCCTGC TGCACGCGCT GGTGCGCGGG
GCGGTGACCG TGACCGGGCC GGAGGCGGAG GCGTTGCGGG CGGCTCTGCC CGCCGAACCG
GTGGTGGTCG TCGCCGCAGA CCCGAGCCCG GCCGCCGTGT CGTGGGGGCG CGGCGCCGAG
GAAGGCCTGG CCGCTGTGGT GGACGGCCGG TTCACGTTCC TGGGCAGTGC CCGCTCGGAT
CCGGCGGGCA GCCTGGCCGC GTTCACCGGG GGCCCGGTGG GCGTGAGCGA GGAGGTCGGC
TACGACGCGC TTCCCGAAGC GCTGGCCCAG GCGGAGCGGG CCTTGGAGGT CGCGCAGCGC
GACGCTGCCG CCCTGGTCCG CCACACCGAC CTGCCAGGCG GTTTCCTGGG ACTGTTGGAC
ACCCCGGCCG GGACAGGCAT GGCCCAGCGG CTGCTCGCCC CGCTGCGCGA GCACCGGGCT
AGCGCGGACT TGCTGGCGTC ACTGCGCGCC TATCTCGCCG CATCGGGCCG GTGGGATGCC
GCAGCCGAGT CGCTGGGGGT CCACCGGCAC ACGCTGCGCT ACCGGATCGC GCGGATCCGC
GAACTGCTTC CTGGGGATTT GGACGACCCC GACTACCGGG CAGAGCTGTG GCTGGCGCTG
CGGATGACGG AACGGGACTA G
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| Protein sequence | MPPSLGAILR TPRLQLRLLH GTDKLDTPVR WVAVSELTDP TPYLEGGELL LTTGMRWTHE
MVDARAYVQR LVDRGVAGLG FGIGVVHEQV PSTLVDAVAE YGLPLIAVPR PTPFIAIGKE
VSRMLAREEY EGLTKAFAAQ RQLTRAALQG AEAVVDRLGA ELPEGWVLLL APDGSPLHAR
PAQAASHAAG LAGELRRLQE LRQPASVSLS ADSRHITVQP LGVAGRVRGF LAVGAPRALG
TEERTLLNAA SSLLSLELER GDSAVTDRLR GGLLHALVRG AVTVTGPEAE ALRAALPAEP
VVVVAADPSP AAVSWGRGAE EGLAAVVDGR FTFLGSARSD PAGSLAAFTG GPVGVSEEVG
YDALPEALAQ AERALEVAQR DAAALVRHTD LPGGFLGLLD TPAGTGMAQR LLAPLREHRA
SADLLASLRA YLAASGRWDA AAESLGVHRH TLRYRIARIR ELLPGDLDDP DYRAELWLAL
RMTERD
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