Gene Tfu_0627 details

Gene Information

• Locus tag: Tfu_0627
• Symbol: leuD
• ID: 3580659
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 730266
• End bp: 730853
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637684320
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_288688
• Protein GI: 72161031
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGAAGT TCACTGTCCA CACCGGCCGT GCGGTTCCGC TGCGCTACAG CAACGTGGAC 
ACCGACCAGA TCATCCCCGC CGTCTACCTC AAGCGGGTGA CCCGCACCGG GTTCGAAGAC 
GGCCTGTTCG CCGCTTGGCG TACTGACCCC GACTTCGTCC TGAACAAGCC GGAGTACAAG 
GACGGCACCA TCCTCATCGC CGGACCCGAC TTCGGCACCG GCTCGTCGCG TGAGCACGCC 
GTGTGGGCGC TGCAGAACTA CGGGTTCAAG GCCGTGCTCT CCTCACGGTT CGCCGACATC 
TTCCGCGGCA ACTCCCTCAA AGGCGGTCTG CTGACCGTGG TGCTCCCGCA GCCGGTCATC 
GAGCAGTTGT GGGAGATGGT CGAGGCCGAC CCCGCTACCG AGATCACCGT GGACCTGGTG 
AATCGCGAGG TGCGCGCCAA GGACATCGTC GAGCCGTTCG AACTGGACGA CTACACCCGG 
TGGCGCCTCA TGGAAGGGCT CGACGACATC GACCTGACCT TGCGTCACGT CGACGCGATC 
GCCGAGTACG AGAAGCGCCG CAAGCCATGG CTTCCGGTCA CCCAATAG 

 

Protein sequence

MEKFTVHTGR AVPLRYSNVD TDQIIPAVYL KRVTRTGFED GLFAAWRTDP DFVLNKPEYK 
DGTILIAGPD FGTGSSREHA VWALQNYGFK AVLSSRFADI FRGNSLKGGL LTVVLPQPVI 
EQLWEMVEAD PATEITVDLV NREVRAKDIV EPFELDDYTR WRLMEGLDDI DLTLRHVDAI 
AEYEKRRKPW LPVTQ