| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0615 |
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| Symbol | |
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| ID | 3581542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 713595 |
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| End bp | 714659 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637684305 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_288676 |
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| Protein GI | 72161019 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase
[TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCTC GTACTGTGAA GCTGGCCGTG ATCCCCGGTG ACGGCATCGG GCCCGAAGTC
GTTGCCGAAG GGCTCAAGGT CCTCTCCGCC GTCGCCCCCC GGCACGGACT CACCCTCGAC
ACCACCGAGT ACGAGTTGGG TGCCCAACGG TGGCATGCCA CCGGTGAGGT CCTGCCGGAC
GCGGTCGAGG AGGAGCTGCG CCAGCACGAC GCCATCCTCC TTGGAGCGGT CGGCGACCCC
ACGGTGCCCA GTGGAGTCCT GGAGCGTGGC CTGTTGCTGC GGTTGCGCTT CAACTTCTCG
CACTACGTCA ACCTGCGGCC GGTCCGGCTC TACCCGGGGG TGACCACCCC GCTGGCCGGT
GTCGCACCCG AAGACATCGA CATGCTGGTC GTGCGCGAGG GAACTGAGGG CCCCTACGCC
GGCATGGGAG GCGTGCTGCG CAAGGGCACC CCCCACGAGA TCGCCACCCA GGACAGCGTC
AACACTCGTC TCGGTGTGGA ACGCGTCGTC CGCTACGCCT TCGCCAAAGC CGCTGAGCGT
CCCTGTCACA AGCTCACCCT GGTCCACAAG GACAACGTGC TGACCTACGC CGGCGAACTG
TGGCAGCGCG TGGTCCGCGA GGTCGGCGCC GAATACCCCC AGGTCGAAGT CGACTACCTG
CACGTCGACG CAGCCACCAT GTTCTTCGTG ACCCAGCCGC GGCGCTTTGA CGTGGTGGTC
ACCGACAACC TCTTCGGCGA CATCATCACC GACCTCGGCG CGGCCGTGGC CGGCGGTATC
GGCCTGGCCG CTAGTGGCAA CATCAACCCC GAGGGCGACT TCCCCAGCAT GTTCGAGCCG
GTGCACGGAT CCGCACCCGA CATCGCAGGA CAGGGCAAGG CTGACCCCAC GGCGACTATC
CTGTCTGTCT CCCTCATGCT GGAACACCTG GGCTACGCCG ACGCAGCAGC ACAAATCGAC
CAGGCGGTAG CCGAGGACCT GCAGGAACGT GCTAAGAACG GTGGAGTCCG CTCCACCACC
CAGATTGGCG ACGACATCGC TCAGCGAGTA GCGGAGCAGG GCTAG
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| Protein sequence | MSARTVKLAV IPGDGIGPEV VAEGLKVLSA VAPRHGLTLD TTEYELGAQR WHATGEVLPD
AVEEELRQHD AILLGAVGDP TVPSGVLERG LLLRLRFNFS HYVNLRPVRL YPGVTTPLAG
VAPEDIDMLV VREGTEGPYA GMGGVLRKGT PHEIATQDSV NTRLGVERVV RYAFAKAAER
PCHKLTLVHK DNVLTYAGEL WQRVVREVGA EYPQVEVDYL HVDAATMFFV TQPRRFDVVV
TDNLFGDIIT DLGAAVAGGI GLAASGNINP EGDFPSMFEP VHGSAPDIAG QGKADPTATI
LSVSLMLEHL GYADAAAQID QAVAEDLQER AKNGGVRSTT QIGDDIAQRV AEQG
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