Gene Tfu_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0563 
Symbol 
ID3581261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp638395 
End bp639201 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content69% 
IMG OID637684253 
ProductPadR family transcriptional regulator 
Protein accessionYP_288624 
Protein GI72160967 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCA TCTTCGGCCA CGGCCGACTC CGCCTGTACC TGTTGAAACT GCTGGACGAA 
AGCCCCCGGC ACGGCTACGA GATCATCAGC CTGCTGCGGG ACCGGTTCCT GGGGATCTAC
TCGCCGTCGC CCGGAACCAT CTACCCGCGC CTGGCCCGCC TCGAAGAGGA AGGGCTCGTG
ACCCACGAAG AGGTCAACGG GCGCAAGGTC TACCGGCTCA CCGACAAGGG CCGCGCAGAA
CTGCGGGAAC GGGAACGGGA CCTCGAAGAC CTGGAACGGC AGATCACCGA ATCGGTGCGG
GACATCGCCC AGGCGGTCCA GCGCGACGTC CGCGACACCA TCAGCCACCT GCGCGAAGAG
CTGAAGGCCA CCGCCCAGCA CACGCGGCGG AGCCGCTCGG AGCGGCAGGA GAGCGCGAAG
ACCGGTGCCG ACGACGTCTG GAGCCGGGCC GCTGACGAGC AGGAGGAGCG CCGGGACAGG
GAGCGCGAGC ACGGGTTTGC GTGGAACCGC GAGTGGGAGA AGTTCGCCCA CACCTTCGGC
TGGGTCTGGC CCAAAGGGCC TAAGGACCGC GCCGCAGGCA GCGGGTTCGA ACGGATCCTG
CACGACTTCA CCCACCGGGT CCGCGACATC ATCCGCGAAA CCGGCGGGAT CAGCGAGGCC
GCGATCGCGG ACCTGCGCCG CATCCTGGAC GAGACGCTCG ACATCATCCG CCGCGACGCT
GCCCGCTGGG GACCCCCGCC GACGGACTCT GCGTCGCGCG CCACAGACAA CGCGGACAAG
GAGCAGACAC CGCGCAGCAC GGAGTGA
 
Protein sequence
MTTIFGHGRL RLYLLKLLDE SPRHGYEIIS LLRDRFLGIY SPSPGTIYPR LARLEEEGLV 
THEEVNGRKV YRLTDKGRAE LRERERDLED LERQITESVR DIAQAVQRDV RDTISHLREE
LKATAQHTRR SRSERQESAK TGADDVWSRA ADEQEERRDR EREHGFAWNR EWEKFAHTFG
WVWPKGPKDR AAGSGFERIL HDFTHRVRDI IRETGGISEA AIADLRRILD ETLDIIRRDA
ARWGPPPTDS ASRATDNADK EQTPRSTE