Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0563 |
Symbol | |
ID | 3581261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 638395 |
End bp | 639201 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637684253 |
Product | PadR family transcriptional regulator |
Protein accession | YP_288624 |
Protein GI | 72160967 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCA TCTTCGGCCA CGGCCGACTC CGCCTGTACC TGTTGAAACT GCTGGACGAA AGCCCCCGGC ACGGCTACGA GATCATCAGC CTGCTGCGGG ACCGGTTCCT GGGGATCTAC TCGCCGTCGC CCGGAACCAT CTACCCGCGC CTGGCCCGCC TCGAAGAGGA AGGGCTCGTG ACCCACGAAG AGGTCAACGG GCGCAAGGTC TACCGGCTCA CCGACAAGGG CCGCGCAGAA CTGCGGGAAC GGGAACGGGA CCTCGAAGAC CTGGAACGGC AGATCACCGA ATCGGTGCGG GACATCGCCC AGGCGGTCCA GCGCGACGTC CGCGACACCA TCAGCCACCT GCGCGAAGAG CTGAAGGCCA CCGCCCAGCA CACGCGGCGG AGCCGCTCGG AGCGGCAGGA GAGCGCGAAG ACCGGTGCCG ACGACGTCTG GAGCCGGGCC GCTGACGAGC AGGAGGAGCG CCGGGACAGG GAGCGCGAGC ACGGGTTTGC GTGGAACCGC GAGTGGGAGA AGTTCGCCCA CACCTTCGGC TGGGTCTGGC CCAAAGGGCC TAAGGACCGC GCCGCAGGCA GCGGGTTCGA ACGGATCCTG CACGACTTCA CCCACCGGGT CCGCGACATC ATCCGCGAAA CCGGCGGGAT CAGCGAGGCC GCGATCGCGG ACCTGCGCCG CATCCTGGAC GAGACGCTCG ACATCATCCG CCGCGACGCT GCCCGCTGGG GACCCCCGCC GACGGACTCT GCGTCGCGCG CCACAGACAA CGCGGACAAG GAGCAGACAC CGCGCAGCAC GGAGTGA
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Protein sequence | MTTIFGHGRL RLYLLKLLDE SPRHGYEIIS LLRDRFLGIY SPSPGTIYPR LARLEEEGLV THEEVNGRKV YRLTDKGRAE LRERERDLED LERQITESVR DIAQAVQRDV RDTISHLREE LKATAQHTRR SRSERQESAK TGADDVWSRA ADEQEERRDR EREHGFAWNR EWEKFAHTFG WVWPKGPKDR AAGSGFERIL HDFTHRVRDI IRETGGISEA AIADLRRILD ETLDIIRRDA ARWGPPPTDS ASRATDNADK EQTPRSTE
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