| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0534 |
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| Symbol | |
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| ID | 3580332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 606046 |
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| End bp | 607305 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637684222 |
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| Product | deoxyribodipyrimidine photo-lyase type I |
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| Protein accession | YP_288595 |
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| Protein GI | 72160938 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0776453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCACCA CCGTCGTGCT GTTCACCCGT GACCTTCGGG TGTCCGACCA TCCCGCACTG
CACGCCGCAG TCACCGAAGC GGACCGGGTG GTGCCGCTGT TCGTCGTCGA CCCGGCGCTG
GTGCGGGTCT CGGCACGCAA TCGGATCGCC TATCTGCTCG AGGCGCTGGC CGAGCTCCGC
GGGCTGCTGC GGGAGCGCGG CGGCGAGCTT GTCGTCCGCC AGGGGGACAC GGTCGCCGAA
ACCGTCCGTA TCGTGGCGGA GGCCGGGGCA CAAGCGGTGT ATCTCAGCGC GGATGTGAGC
GCGGCCGCGG TGCGGCGGGC CCGGCAGTTG ACGGAGGCGG TGAGGGCTGC GGGGGCCCAC
GTGCGGACTT TCCCGGGGGT GACCGTGGTG CCGCCGGGAG CGCTGCGCCC CGCGCACGGC
GACCACTACC AGATCTTCAC CCCGTATCTG AACGCGTGGC GTGCCGCGCA GTGGCGGTCC
CCGCGGCCCG CCCCGGAGCG GGTGAGGCTG CCGGAGGGTC TGGTGCCGGG GCCGCTGCCC
GGCGCTGAAC TGATCCGGCT GGGGACGGGG GTGCTCGCCC CGCAGCGGGA GCAGGGCGGA
CCTCGTACCG CGCGGGAGCG GATCCGCGCG TGGCTTGCCC AGCCCAACCA GGATTCCCGG
TTCGGCTGCC ATCTGCATTT CGGTTGTCTT TCCCCGTTGG AGGTGGCGCT CGTGGCGCGG
GAGCACCCTC GGGGTGCGCT GCTCCTGCGG CAGTTGGCGC TCCGCGACTT CCACCACCAG
GTGCTGCAGG CTTTCCCGCG GTTGCCCCGG GCCGACTATC GGCCGCGGCC CATCCAGTGG
CGGGATGACG ATTCCGCGTT TGCGGCGTGG TGTTCGGGCA GGACGGGTGT TCCCATCGTG
GATGCGGGAA TGCGCCAATT GCTGTGGGAG GGGTACGTGC CGGGGCGGAT CCGGATGCTG
ACCGCCACCT ATCTCACCCA GGTGCTGCGC ATCCACTGGA AGCGGGGCGC GGACCACTTC
TACTCCCTGC TGGTGGACGG GGATGTCGCG AACAACTACG GCAACTGGCA GCAGATCGCG
GGCACCGGGG GCGTGCCGCG GCCAGCGCGC CGGATCAATC TGTACCGGCA GGCGGAGCGC
TACGACCCCA GCGGCGACTA TGTGCGCCGT TTCGTTCCGG AGTTACGCAG CATTTCCGGG
AGCGCGGTCC ACCATCCTCC GGTGCCGCGT CCGGGCGGCT ATCCGCCGCC GCTGCGGTAG
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| Protein sequence | MSTTVVLFTR DLRVSDHPAL HAAVTEADRV VPLFVVDPAL VRVSARNRIA YLLEALAELR
GLLRERGGEL VVRQGDTVAE TVRIVAEAGA QAVYLSADVS AAAVRRARQL TEAVRAAGAH
VRTFPGVTVV PPGALRPAHG DHYQIFTPYL NAWRAAQWRS PRPAPERVRL PEGLVPGPLP
GAELIRLGTG VLAPQREQGG PRTARERIRA WLAQPNQDSR FGCHLHFGCL SPLEVALVAR
EHPRGALLLR QLALRDFHHQ VLQAFPRLPR ADYRPRPIQW RDDDSAFAAW CSGRTGVPIV
DAGMRQLLWE GYVPGRIRML TATYLTQVLR IHWKRGADHF YSLLVDGDVA NNYGNWQQIA
GTGGVPRPAR RINLYRQAER YDPSGDYVRR FVPELRSISG SAVHHPPVPR PGGYPPPLR
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