| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0526 |
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| Symbol | |
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| ID | 3578992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 597347 |
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| End bp | 598741 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684214 |
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| Product | putative peptidase |
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| Protein accession | YP_288587 |
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| Protein GI | 72160930 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.718218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTGC GAGCCCACAT CGAGGCGCAC CGGGACGAGT TTGTCGCCAC ACTCAGCCAG
TGGCTCGCCA TCCCGTCGAT CTCCGCCGAC CCTGCCCACC ACGATGACGT GCGCCGCTCC
GCCCAATGGC TGGCCGACCA CTTCACCCAG ACCGGTTTCC CGACCGTAGA AATCTGGGAG
ACCCCCGGAA TGCCCGCGGT CTTCGCCGAA TGGCCCGCCG CCGACCCGGA GGCCCCCACC
GTCCTCGTCT ACGGTCACCA CGACGTCCAA CCGGTCGACC CAGTCGACGC GTGGCACACC
GACCCGTTCA CCCCCACCGT GCGCGGAGAC CAGCTCGTCG GCCGCGGCGC TTCCGACGAC
AAAGGACAAA TCCTCTTCCA CACCCTGGGA CTCCGCGCCA ACCTGGCCGT CTCCGGTGCC
GACGCCCCGC CGGTCACCCT CAAATTCCTG ATCGAAGGCG AGGAAGAATC CGGCTCCCCG
CACTTCGCGG ACCTGCTCAC CCGCCACCGC GCCCGGCTGG CCTGCGATGT CATCGTCATC
TCCGACACCA CCATGTGGAG TGCGGACACC CCGTCGATGT GCATGGGCAT GCGCGGCCTC
ACCGACTGCC AGATCGACGT CTACGGCCCC CGCACCGACC TGCACAGCGG CTCCTTCGGC
GGCGCCGTCC CCAACCCGGC GCGCGCCCTC GCCGCCCTGC TCGCCGGACT CCACGACGCC
CACGGCCGAG TCGCCATCCC CGGCTTCTAC GACGACGTCG TCGAAGCGTC CCAAGCCGAA
CGCGACACCA TCGCCCAACT GCCCTTCGAC GAAGCAGCCT GGCTCGCCAA CGCCGGCAGC
GACGCCACGG TCGGCGAAGC CGGGTACAGC ATCCTCGAAC GGGTCTGGCT GCGGCCCACC
GCCGAAATCA ACGGCATGTG GAGCGGATAC ACCGGGGAAG GCAGCAAGAC GATCGTGCCG
CGGTCTGCCC ACGCCAAACT CAGCTTCCGC CTCGTCCCCA ACCAGGAACC GGCGCGCATC
CAAGAACTCG TCCGCCGCTA CGTCCACGAC AACCTTCCCC CCGGAGTGCG GGCGGACGTC
CGCTTCAGCG GTGCCGGAGT GCGGCCCTGC GCCTCCGACC TGGACTCGGT GGCGGTGCGC
GCTGCCCGCG ACGCGATGGC CAAGGCGTTC GGAACCAAGG TCTACTCCAC CCGGGAAGGT
GGCAGCGGCC CCGAAGCGGA CCTCGCCGAC ATCCTCGGCG CCCCCCTGGT CTTCGTCGCG
GTGGGCCTCA ACTCCGACCG CATCCACGCT CCCAACGAGA AAGTCGAGAT CCCGCTGCTG
CTCAAAGGCG CCGAAACCGT CGCCTACCTG TGGGACTCGT ATGCCACCGT GCTCCGCAGC
GGGGACCGGG CATGA
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| Protein sequence | MDVRAHIEAH RDEFVATLSQ WLAIPSISAD PAHHDDVRRS AQWLADHFTQ TGFPTVEIWE
TPGMPAVFAE WPAADPEAPT VLVYGHHDVQ PVDPVDAWHT DPFTPTVRGD QLVGRGASDD
KGQILFHTLG LRANLAVSGA DAPPVTLKFL IEGEEESGSP HFADLLTRHR ARLACDVIVI
SDTTMWSADT PSMCMGMRGL TDCQIDVYGP RTDLHSGSFG GAVPNPARAL AALLAGLHDA
HGRVAIPGFY DDVVEASQAE RDTIAQLPFD EAAWLANAGS DATVGEAGYS ILERVWLRPT
AEINGMWSGY TGEGSKTIVP RSAHAKLSFR LVPNQEPARI QELVRRYVHD NLPPGVRADV
RFSGAGVRPC ASDLDSVAVR AARDAMAKAF GTKVYSTREG GSGPEADLAD ILGAPLVFVA
VGLNSDRIHA PNEKVEIPLL LKGAETVAYL WDSYATVLRS GDRA
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