Gene Tfu_0442 details

Gene Information

• Locus tag: Tfu_0442
• ID: 3579833
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 500871
• End bp: 502811
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 637684130
• Product: von Willebrand factor, type A
• Protein accession: YP_288503
• Protein GI: 72160846
• COG category: [R] General function prediction only
• COG ID: [COG4867] Uncharacterized protein with a von Willebrand factor type A (vWA) domain

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGGAT TCCGCTACCG GAGTTACGTG GACGGCCCCG ACCCGTTGCG TCCCCCTTTC 
GACGTGCGTT CCGCGGTGGA CGCGCTGGGG CGTGCGGTGC TGGCCGGTGC GTCGCCCACG 
CGGGCGCTGC GTGATCTGCT GCGCCGCGGC ACCCGCGGGG TGCGCGGACT GGACGAGCTG 
CTGCGCCACG TGCGGGAACG GAAGGAGCAG CTCCGCTCGC AGGGCAGGCT GGACGGCACG 
CTCGCCCAGG CGCGCCGCCT GCTGGACCAG GCCGTGGGCC AGGAGCGGGC GGTGCTCTTC 
CCGGATCCGA GCGACGAAGC CCGGCTCCGG GAACGGGAGC TCGACGACCT GCCCGCTGAT 
CCGGCCGCGG CGATCCGGCG ACTCGCCGGC TACCAGTGGC GCTCTCCGGA CGCCCGTCAG 
ACGTTCACCC AGCTCCAGGA GCTGCTGCGC CGCGAAATCC TCGACGCCCA GTTCCGCGGT 
ATGCGGCAGG CCATGGCCCG GGGCACGCCT GAGGAGCTGC AGCGGGTGCG CGCCATGCTG 
GACGCGCTGC ACGGGATGCT GGACGCGGAC GACCGCGGGG AGCACACCCA GGCCGACTTC 
GAGCGGTTCA TGGCCGAGTT CGGGGACTTC TTCCCGGACC GTCCGCGTAC CCTCGACGAG 
CTTGTGGACG TGCTGGCCTG CCGTTCCGCG GCCATGCAGC GGCTCTTCGA CTCGCTGACC 
CCCGAGCAGC GGGCCGAACT GCTGGCGCTT AGCGCGCAGG TCATGCGGGA CGCCGGGCTG 
GCCGACGCGG TCCAGCGGCT CGGGGAGCGG CTGCGGGCCC GCCGCCCCGA CCTGGTCTGG 
TCCGGCGGGG TCGCGGTCGA CGGGGACGCG GAGCTCGGGC TCGGCGACGC CACCACTGCG 
GTGGCGGAAC TCGCTGACCT GGCTGAACTG GAGGAGGCTC TCGGCCAAGG GTACGCGGGG 
GCCCGGCTGG ACGACATCGA CACGGCCGCA CTACAGCGGG TGCTGGGCCG GTCCGCAGCC 
GAGGATGTGG CGCGGCTGCG CGCCCTGGAG CGGGAGCTCC GCGACCGGGG CTACCTGTCG 
GGGTCGCGCG ACCGGGTGCA GCTCACCCCG AAGGCGGTGC GGGCGCTCGG GGAGGTGGCG 
CTGCGCGACG TACTGTCCGG TGCGGGGCGG CGTCCCGGCA CGCACGACAC GCGGGAAGGG 
GGCCCGGCCG GGGAGCTGAC CGGAGCCAGC CGGCCGTGGC GTTTCGGGGA CGAGCAGCCG 
TTGGATGCGG TGCGGACCGC CATCAACGCG GTCCGGCGCG GCGCATCCTC TGAAGGCCGC 
CTCCGGTTGC GCCCCGAGGA CATGGAGGTG GCGGAGACTG AGCGGCGCGA CGCGGCCGCG 
GTGTGCCTCC TCGTGGACTT GTCGTATTCC ATGGTGCAGC GCGGTTTGTG GGGGGTGGCC 
AAGCAGACCG CGTTGGCGCT GCACACGCTG GTGTCCACCC GGTTTCCGCA GGACGCGGTC 
TACGTCATCG GGTTCAACGA CCATGCCCGG GTCTTGGCTC CCCGCGAGCT GGCGGAGTTG 
TCGCCGGAAC CGGTCCAAGG CACGAACCTG CACCACGCGC TGCTGCTTGC CGGACGGCAT 
GTGGACCGGC ACCCGGAGTT CGAGCCGGTG GTGCTGGTGG TGACCGACGG GGAGCCGACC 
GCGCACCTGG AGGAGGACGG GCTGCCGTAC TTCTCGTATC CGCCTTCGCC CCGCACCACA 
GAGTTGACAC TGGCGGAGGT GGACCGGATG ACCCGGCGCG GAGCGCGGAT GACAGTGTTC 
TCCCTGGCGG ACGATCCGCG GCTGGAAGAG TTCGTCACCG CGCTCGTGGC CCGCAACGGC 
GGCCGCGCCC TCCGCCCGGT CGCCGACCAG TTGGGGTCGT TCGTGGTGCG GGACCTGCTG 
GCACAACGCT CCCGGTGGTG A 

 

Protein sequence

MSGFRYRSYV DGPDPLRPPF DVRSAVDALG RAVLAGASPT RALRDLLRRG TRGVRGLDEL 
LRHVRERKEQ LRSQGRLDGT LAQARRLLDQ AVGQERAVLF PDPSDEARLR ERELDDLPAD 
PAAAIRRLAG YQWRSPDARQ TFTQLQELLR REILDAQFRG MRQAMARGTP EELQRVRAML 
DALHGMLDAD DRGEHTQADF ERFMAEFGDF FPDRPRTLDE LVDVLACRSA AMQRLFDSLT 
PEQRAELLAL SAQVMRDAGL ADAVQRLGER LRARRPDLVW SGGVAVDGDA ELGLGDATTA 
VAELADLAEL EEALGQGYAG ARLDDIDTAA LQRVLGRSAA EDVARLRALE RELRDRGYLS 
GSRDRVQLTP KAVRALGEVA LRDVLSGAGR RPGTHDTREG GPAGELTGAS RPWRFGDEQP 
LDAVRTAINA VRRGASSEGR LRLRPEDMEV AETERRDAAA VCLLVDLSYS MVQRGLWGVA 
KQTALALHTL VSTRFPQDAV YVIGFNDHAR VLAPRELAEL SPEPVQGTNL HHALLLAGRH 
VDRHPEFEPV VLVVTDGEPT AHLEEDGLPY FSYPPSPRTT ELTLAEVDRM TRRGARMTVF 
SLADDPRLEE FVTALVARNG GRALRPVADQ LGSFVVRDLL AQRSRW