Gene Tfu_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0417 
Symbol 
ID3579941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp469518 
End bp470159 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content68% 
IMG OID637684104 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_288478 
Protein GI72160821 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGGTC TTCTCGCACG GCTGTGGGGA GGCCGCGCGT CTGTGTCCAG GGAACCGGAT 
GCGCGGCCGG GAGAAAGTGG TGCGGTGGTG AGCGGCGAGC GTTGGCTGGT CGTGGGGCTG 
GGCAATCCCG GGCCCAAGTA TGCGGGCAAC CGCCACAACG TGGGTTTCAT GGTGGTGGAC 
GAGTTGGCCG CGCAGCGGGG CGAACGGTGG CGGTTGCACA AGGCCCACGC CCAGGTGGTG 
GAGACACGCG TGGGTGATGC GCCGGTGGTG CTGGCCAAAC CGGCTTCGTA TATGAACCTG 
TCCGGCGGAC CGGTGGCCAA GCTGAGTGCT TTCTACAAGG TGCCGGTCGA CCGCATCATC 
GTGGTCCACG ACGAGCTGGA CATTCCGTTC GCCCGGCTGA AGCTGAAGCG GGGCGGCGGG 
TCGGCCGGGC ACAACGGCCT GCGTTCGATC ACCGCCTCAC TGGGCTCTCC GGACTACGTG 
CGGGTGCGCG TGGGGATCGG ACGTCCGCCG GGGCGGATGG ATGCGGCGTC GTTCGTGCTG 
CAGGACTTTT CCACCGCGGA GCGCAAGGAA CTGGATGTGC ATGTGGCGCG GGCGGCCGAC 
GCGGTGGAGA CAGTGGTGAC GTCCGGGTTG GAGAAAGCCT AA
 
Protein sequence
MRGLLARLWG GRASVSREPD ARPGESGAVV SGERWLVVGL GNPGPKYAGN RHNVGFMVVD 
ELAAQRGERW RLHKAHAQVV ETRVGDAPVV LAKPASYMNL SGGPVAKLSA FYKVPVDRII 
VVHDELDIPF ARLKLKRGGG SAGHNGLRSI TASLGSPDYV RVRVGIGRPP GRMDAASFVL 
QDFSTAERKE LDVHVARAAD AVETVVTSGL EKA