Gene Tfu_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0369 
Symbol 
ID3579583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp415557 
End bp416201 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content74% 
IMG OID637684054 
Producthypothetical protein 
Protein accessionYP_288430 
Protein GI72160773 
COG category 
COG ID 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.368069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCT TCTCCACCAC TGCCCGCCGC CCGTTCTGGG CACGTTGGCA CCGCTGGCGC 
CGACTCTTGG CCGCAACAGC CGCTGCGCTG GCCGCGGCCG GGGCACTGCT GGTGCTCCGT 
CCCCCTGCCC CGCCTGCCGT GGAAGTGCTG GTCGCCGCCC ATGACCTGTC CGGGCTCGTC 
CCGCTGACCG ACGCGGACAC GGTGGCCCGC AGCATCCCCG CCGCTGTCGT CCCTGACGGG 
GCGCTGGCCC CAGGTGATCC CGTGGCGGGG AGGGCACTGC GCTCACCGGT GCGTGCCGGG 
GAGATCCTCA CCGAGGTGCG GCTGGCGGAT CCGCCCGCCG CCGGGTACGG CGCCGACCTG 
GTGGCGGCTC CCGTGCGCCT TGCCGACCCC GGGGCGGCCG CGCTGCTGCG TCCAGGCAGC 
CGTATCGACG TGCTTGCCGC TGCTGGCGAC CCGCCGGTGG TCGACTACCC CGGACCGGAC 
ACGGCCCGCA GGATTGTGCG GGACCGGCCG GTGATCACCG TGGTCGCCGA AGACGATGCC 
GCGCACAGCC TGGGGACTCT CATCGTGCTC GCGGTCACCG ACGAGGAGGC GCAAGCGCTC 
GCCGGGCACG CTGCCGACCG GCTGTCGATT GCGATCCGCG GATGA
 
Protein sequence
MKLFSTTARR PFWARWHRWR RLLAATAAAL AAAGALLVLR PPAPPAVEVL VAAHDLSGLV 
PLTDADTVAR SIPAAVVPDG ALAPGDPVAG RALRSPVRAG EILTEVRLAD PPAAGYGADL 
VAAPVRLADP GAAALLRPGS RIDVLAAAGD PPVVDYPGPD TARRIVRDRP VITVVAEDDA 
AHSLGTLIVL AVTDEEAQAL AGHAADRLSI AIRG