Gene Tfu_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0287 
Symbol 
ID3578884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp323675 
End bp325906 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content68% 
IMG OID637683971 
Productprotein phosphatase 2C-like protein 
Protein accessionYP_288348 
Protein GI72160691 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.575817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACACA GTGTCACGAA AACCGTCCGC CGAGAGTTCT CACCCACCCC GGAAACGGTG 
GGGGAGGCAC GCACGTTCGT CAAAGACACA CTGCAGCACT GGGAGGTGCA GCGGAGCGCA
GACGAGATCG TCCTGCTGAC CAGCGAACTC GTCACCAACG CGGTCGTCCA CGCGAAGACG
ACCCTGGAAC TCACCGTAAG CCTGATCGGC AGCGATGTCG AGGTGGTGGT CGCCGACCGG
GTGCCGCATC AGGCGCTGCC CAAAGCCGGT CCCCTCCGTG TCGTCCTCTC CTCAGACGAG
GACAGCCGTG GCGGCCTGGG CCTCGCTTTA GCGGAGGCGA TCGCCGACAC GTGGGGAGTC
AGCTACAGCA GGGACGACAA AGCAGTCTGG TTCCGGATCT CGACTCAGGA ACGCACTAAA
GAAACCGCAC GCTCCTCCTT GTCGCCGCCG CGGAGCATCC GCAGCCACCC ACGCTCCAGC
CCGCCGGAAC CGTGGGCGCG CCTCGACGCG TTGCTCTCCG CACGGCTGTC CCCCTCGGAA
CTCCTGGAAC GGATCGTGGA GCACGTCCGC GTGGTGCTCG GCGGAGACGC CGCCTATATC
GCGCTCGCCA CCGCCGACCA CACCGAATGG GAGATGGCTG CCGCGGTCGG ACTCTCCGCA
GGCCCGTGGC GGCCGTTCCG CAGCCGCATC GAAGAGACTT TCCCCGCTGC CACCCCGGAA
GCCCGGCCGA TGATCAACGA CGACTTGATG ATCGCCAGCG CCCACCGGGG AGTGCTCGCC
GCCGCAGGAA TGCGGTCCCT GGTCACCGCA CCGCTCAGTG TCGACGGCAG GATCACCGGG
CTGATCGGGG TCGCTTCCCG CCGGGTCCGC CACTTCGGGA AGAACGCGGC CCGCCGCCTC
CAAGAAGCCG CTGACCGGAT CGCCCTCACC GTGGAACGCG CCCGCCTCGC CCAAGTGGAA
ATCCACCGGC GGGCCGCGCT CAGTTTCCTC GCCGAAGCCA ACGACCTGCT GTCCGGGACG
CTCGACGAGC AGATGACCGC GGCGCTCGCC GCACAGCTCA GCACGTCGCG GCTGGGCCAC
TGGTGTGTGG TGCACACGGT CGACGAGCTG GGCACCCACC AGTTGGCGTT CGCCATGCAC
CGGGACGAGA ACGTCACCGA CATCCTCCGC GACCTGGTGA CCGCGCTCAT GCCTGAAGAG
CGGCGGGACC CTGGGCCGCT GTGGCCGGTC GAGAAAGTGG TCGCGGCCGG CCTGGGGGAC
GAGCTCAGCC TGGAGCTTGC CCAAGGGCCG GGGATCAGCC TGCCGCTGAC CGCGTACGGC
CGCATCCTGG GCCGGATCAC GATCGGGCGG GACGTCGGCG AAGACTTCCC GAAAGAGGAC
GTGGACCTCG CCGCCGACCT GGCCCAGCGG GTCTCCTCGG CCATGGAGAA CGCGCGGCTG
TATTCAGCGC AGACGTCCAT GAGCGAAGCG TTGCAGCGCA GCCTGCTACC CGCCCGGGAG
AAGCAGCCCG TGGTTCCCGG CGTGGACTAC GCGGTGTTCT ACCAGCCCGC TGGGGAGCGC
ACCGTGGTGG GCGGGGACTT CTACGACCTG TTCGCCACTG ATGGGCGCTG GTGTTTTGCG
ATCGGGGACG TGTGCGGGAC CGGCCCGGAG GCCGCCGCCG TCACCGGACT GGCCCGGCAC
ACGCTGCGTG CCCTGGCCCG GGAAGGCTTC TCCCCCGCGC ACATCATGCA CCGGCTCAAC
TTCGCGATCC TGGAAGAAAG CCTCACCATC CGGTTTTTGA CCATGCTGTA CGGGGAGATG
ACCCCGATCG GGCCGAACGC GGAACGCGGG ATGCACATCC GGCTCGTCTC CGCCGGGCAT
CCACTGCCGC TGCGGTTGAA CCGCCACGGC GAGGTCACCA CGCTGGCGAC CTCTCAACCG
CTGCTGGGGG CTTTCGAGGA CGTGGAGTTC TTCACCGAAA CCGTGGAGGT GGAGCCCGGC
GATGTCCTGC TCGCGGTGAC CGACGGGGTT ACCGAGCGGC GCAACGGCGA CGAGATGCTC
GGCGATGAAG GACTGGTGGA GATCTTCTCC CGGTGCTCTG GGTTGACCGC GCAGGCGGTC
ATCTCCCGTA TCGGCCGGGA ACTGGAGGCG TTCGCGCCGG GCGGGCACAC CGACGACACG
GCGATGCTTG TGCTGCGGTT CCTCGAACCT CGCCCTGCGG AGCAGCAGGA GCGGATGCTG
CTCGGCGGGT GA
 
Protein sequence
MPHSVTKTVR REFSPTPETV GEARTFVKDT LQHWEVQRSA DEIVLLTSEL VTNAVVHAKT 
TLELTVSLIG SDVEVVVADR VPHQALPKAG PLRVVLSSDE DSRGGLGLAL AEAIADTWGV
SYSRDDKAVW FRISTQERTK ETARSSLSPP RSIRSHPRSS PPEPWARLDA LLSARLSPSE
LLERIVEHVR VVLGGDAAYI ALATADHTEW EMAAAVGLSA GPWRPFRSRI EETFPAATPE
ARPMINDDLM IASAHRGVLA AAGMRSLVTA PLSVDGRITG LIGVASRRVR HFGKNAARRL
QEAADRIALT VERARLAQVE IHRRAALSFL AEANDLLSGT LDEQMTAALA AQLSTSRLGH
WCVVHTVDEL GTHQLAFAMH RDENVTDILR DLVTALMPEE RRDPGPLWPV EKVVAAGLGD
ELSLELAQGP GISLPLTAYG RILGRITIGR DVGEDFPKED VDLAADLAQR VSSAMENARL
YSAQTSMSEA LQRSLLPARE KQPVVPGVDY AVFYQPAGER TVVGGDFYDL FATDGRWCFA
IGDVCGTGPE AAAVTGLARH TLRALAREGF SPAHIMHRLN FAILEESLTI RFLTMLYGEM
TPIGPNAERG MHIRLVSAGH PLPLRLNRHG EVTTLATSQP LLGAFEDVEF FTETVEVEPG
DVLLAVTDGV TERRNGDEML GDEGLVEIFS RCSGLTAQAV ISRIGRELEA FAPGGHTDDT
AMLVLRFLEP RPAEQQERML LGG