| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0279 |
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| Symbol | |
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| ID | 3579935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 311344 |
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| End bp | 312798 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637683963 |
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| Product | betaine-aldehyde dehydrogenase |
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| Protein accession | YP_288340 |
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| Protein GI | 72160683 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03374] 1-pyrroline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAGCC ACTCCGACGG CCTGCGCCGC CTGCGTAACT TCATCAATGG TGAGTACGTA
GACTCCGTCG ACGGCCGAAC CGCACCGGTC GTCAACCCAG CCACGGGTGA GGCCTACGCC
GAAGCACCGG TGTCCACGGC AGAAGACGTG GACCGGGCCT TCCGTGCCGC CGCCGACGCC
TTCGAGAACG GGTGGCGCGA CTCCACCCCC GCCGAACGGC AGATCATCCT GAACAAGATC
GCCGACGCAG TGGAGGAACG CGCCGACGAG CTTGTCGCCG CCGAAGTCGA GAACTGCGGA
AAGCCTGTCA AGGCCACGCG CGAGGAAGAG ATCTGGCAGG TCACCGACGC GCTGCGGTTC
TTCGCTGGTG CGGCACGGGT GCTGGAGGGC AAGGCGGCCG GCGAGTACAT GGCCGACCAC
ACCTCCTGGA TCCGCCGCGA ACCCATCGGC GTCGTCGGCC AGATCACTCC CTGGAACTAT
CCGATGGCGA TGGCCGCGTG GAAGATCGGA CCGGCGCTCG CTGCGGGCAA CACCATCGTC
CTCAAGCCGT CCGACACCAC GCCCGTCTCC ACTCTGCTGC TCGCCGAGAT CGCCGCAGAA
TTCCTGCCGC CCGGCGTGTT CAACGTCGTC ACTGGTGACC GCGACACCGG GCGCGCCCTC
GTCGACCACC CGATCCCGCG GCTCGTCTCG CTCACCGGGT CCACCCGCGC CGGATACGAG
GTCGCCCAGT CCGCATCCCG CGACCTCAAG CGGCTCCACC TGGAGCTGGG CGGCAAAGCC
CCGGTGATCG TCTTCGACGA CGCGGACGTC GAGAAGGCCG CCGAAGGCAT CGCCGGAGCC
GGGTACTTCA ACGCGGGACA GGACTGCACT GCTGCCACCC GCGTGCTGGC CGCCCCCGGC
ATCCACGACG ACCTGGCCGC GGCACTTGCT GAACAGGCGA AGAAGACCAA GACCGCCGGC
CCGGACGAGA CCGACGCTTA CTACGGTCCG CTGAACAACC CCAACCAGTT GGACCGGGTC
AGCGGCTTCT TCGAGCGCCT CCCCGACCAC GCCGAAGTGC TCACCGGCGG TTCCGCCGTG
GACCGTCCCG GCTACTTCTT CTCGCCCACG GTCGTGTCCA ACCTGCGCCA AGGCGACGAG
ATGGTCTCCG AAGAGATCTT CGGGCCGGTC ATCACGGTCC AGCGCTTCGA CGACGAGGAC
ACGGCGGTCG CGTGGGCCAA CTCAGTAAAG TACGGACTGG CATCCAGTGT GTGGACCAAG
GACCACGCGC GCGCTCTGCG GGTCTCCCGT CGCCTCGACT TCGGATGCGT GTGGATCAAC
ACGCACATCC CGATCATCGC GGAGATGCCG CACGGAGGCT TCAAGCACTC CGGATACGGT
AAGGACCTGT CCCTTTACAG CCTGGAAGAG TACACGCGCA TCAAGCACGT GATGAGCTAC
ATCGGCAGGG ACTGA
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| Protein sequence | MTSHSDGLRR LRNFINGEYV DSVDGRTAPV VNPATGEAYA EAPVSTAEDV DRAFRAAADA
FENGWRDSTP AERQIILNKI ADAVEERADE LVAAEVENCG KPVKATREEE IWQVTDALRF
FAGAARVLEG KAAGEYMADH TSWIRREPIG VVGQITPWNY PMAMAAWKIG PALAAGNTIV
LKPSDTTPVS TLLLAEIAAE FLPPGVFNVV TGDRDTGRAL VDHPIPRLVS LTGSTRAGYE
VAQSASRDLK RLHLELGGKA PVIVFDDADV EKAAEGIAGA GYFNAGQDCT AATRVLAAPG
IHDDLAAALA EQAKKTKTAG PDETDAYYGP LNNPNQLDRV SGFFERLPDH AEVLTGGSAV
DRPGYFFSPT VVSNLRQGDE MVSEEIFGPV ITVQRFDDED TAVAWANSVK YGLASSVWTK
DHARALRVSR RLDFGCVWIN THIPIIAEMP HGGFKHSGYG KDLSLYSLEE YTRIKHVMSY
IGRD
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