Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0197 |
Symbol | |
ID | 3579966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 223425 |
End bp | 224219 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637683880 |
Product | molecular chaperone GrpE (heat shock protein) |
Protein accession | YP_288258 |
Protein GI | 72160601 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.135076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGTGC CGGAGAACGA GCACAGCACG GACAAGCAGG GGCCGGTGAT CCGCGACAAG CGGCGGATCG ACCCCGAAAC CGGCCAGCCG CGCGTTCCAG AGGGGGAGGC CGCGTCGCCC TCTGAGGACT CCGCGGCTGC GGCAGCCGAA TCCACGACGG CACAGCCAAC CGACGAGGAG AACGCGGAGC TGATCCGGCT GCGGCAAGAG GTCGCGGAAC GCACCGACGA CCTCAAGCGG CTGCAGGCGG AGTACATCAA CTACCGCAAG CGGGTCGACC GGGACCGCGC CGCAATGCGG GAGCAGGCAC TCGTCCAGGT CCTCACCGAG CTGCTGCCGA TCTTGGACGA CATCGGCCGA GCCCGGCAGC ACAACGAACT GGTCGGTGGC TTCAAGTCCG TGGGCGAGGC GCTGGAGTCC TTGGTCGCTC GGATGGGGTT GAAGAAGTAC GGCGAGAAGG GCGACGAGTT CGACCCGACC GTGCACGAAG CCCTGTCCAT GGTGCCCTCG ACTGACGTGA CCGTCCCGAC CGTCATCGAG GTGTTCCAGC CCGGATACCT CATCGGTGAC CGGGTGGTCC GTCCGGCCCG CGTGGTCGTG GCAGGGCCAG CCGAGGAGGA CACGTCCGCC TCGGAAGAAG AGAAGAAGGA AGAGGCTGCA ACCGAGGAGG CTGCCGCACC GTCCGAATCA GACGACGAGG CGAAACCTGC TGAAGCGTCC GAGTCGGCGG AGGCCGCGGA ATCCACGGAG CAGTCTGACG CCACCGCGGA CAAGAACACC GCGGACGAAC AGTAG
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Protein sequence | MAVPENEHST DKQGPVIRDK RRIDPETGQP RVPEGEAASP SEDSAAAAAE STTAQPTDEE NAELIRLRQE VAERTDDLKR LQAEYINYRK RVDRDRAAMR EQALVQVLTE LLPILDDIGR ARQHNELVGG FKSVGEALES LVARMGLKKY GEKGDEFDPT VHEALSMVPS TDVTVPTVIE VFQPGYLIGD RVVRPARVVV AGPAEEDTSA SEEEKKEEAA TEEAAAPSES DDEAKPAEAS ESAEAAESTE QSDATADKNT ADEQ
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