Gene Tfu_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0197 
Symbol 
ID3579966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp223425 
End bp224219 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content67% 
IMG OID637683880 
Productmolecular chaperone GrpE (heat shock protein) 
Protein accessionYP_288258 
Protein GI72160601 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.135076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTGC CGGAGAACGA GCACAGCACG GACAAGCAGG GGCCGGTGAT CCGCGACAAG 
CGGCGGATCG ACCCCGAAAC CGGCCAGCCG CGCGTTCCAG AGGGGGAGGC CGCGTCGCCC
TCTGAGGACT CCGCGGCTGC GGCAGCCGAA TCCACGACGG CACAGCCAAC CGACGAGGAG
AACGCGGAGC TGATCCGGCT GCGGCAAGAG GTCGCGGAAC GCACCGACGA CCTCAAGCGG
CTGCAGGCGG AGTACATCAA CTACCGCAAG CGGGTCGACC GGGACCGCGC CGCAATGCGG
GAGCAGGCAC TCGTCCAGGT CCTCACCGAG CTGCTGCCGA TCTTGGACGA CATCGGCCGA
GCCCGGCAGC ACAACGAACT GGTCGGTGGC TTCAAGTCCG TGGGCGAGGC GCTGGAGTCC
TTGGTCGCTC GGATGGGGTT GAAGAAGTAC GGCGAGAAGG GCGACGAGTT CGACCCGACC
GTGCACGAAG CCCTGTCCAT GGTGCCCTCG ACTGACGTGA CCGTCCCGAC CGTCATCGAG
GTGTTCCAGC CCGGATACCT CATCGGTGAC CGGGTGGTCC GTCCGGCCCG CGTGGTCGTG
GCAGGGCCAG CCGAGGAGGA CACGTCCGCC TCGGAAGAAG AGAAGAAGGA AGAGGCTGCA
ACCGAGGAGG CTGCCGCACC GTCCGAATCA GACGACGAGG CGAAACCTGC TGAAGCGTCC
GAGTCGGCGG AGGCCGCGGA ATCCACGGAG CAGTCTGACG CCACCGCGGA CAAGAACACC
GCGGACGAAC AGTAG
 
Protein sequence
MAVPENEHST DKQGPVIRDK RRIDPETGQP RVPEGEAASP SEDSAAAAAE STTAQPTDEE 
NAELIRLRQE VAERTDDLKR LQAEYINYRK RVDRDRAAMR EQALVQVLTE LLPILDDIGR
ARQHNELVGG FKSVGEALES LVARMGLKKY GEKGDEFDPT VHEALSMVPS TDVTVPTVIE
VFQPGYLIGD RVVRPARVVV AGPAEEDTSA SEEEKKEEAA TEEAAAPSES DDEAKPAEAS
ESAEAAESTE QSDATADKNT ADEQ