| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0192 |
|---|
| Symbol | |
|---|
| ID | 3579961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 214616 |
|---|
| End bp | 215782 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637683875 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_288253 |
|---|
| Protein GI | 72160596 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03544] DivIVA domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC GCATTCCTGA GATATTCCCG AACCTGCTGC GCGAAGACGC CTTCCCCACC
GTCCGCAAGG GCGGCTACGA CAAGCGTCAG GTCGACGACT TCGTCGTCCG CAACCACAAC
CAGCTCCGCG ACCTCCAGGA GCGCCTCGCC CGCGCCCACG ACGAGCTGGA GCAGTTGCGT
CGCGAACTCG CCGAGGCCAA AGCCAAGGCC GCGGTCAAGC CGGAACACGA GCAGATCAGC
GAGCGGCTGG CCAACATCCT GCGCATCGCG GAGGAAGAGG CCGCTGACAA GCGAGCTCAG
GTCGACAAGG AAGTCAAGGA GATCCGGGCC AAGGCCGAGG AGGAGGCCAA GGCCAAGATC
AAGAGCGCCC AGGAGCAGGC GGAGCGGATC GTCAACGGCG CTCGGGACGA AGCCAAGGAG
CTGCTCACCT CCACCAAGCA GGAGGCCGAG CGGCTGCGCG AGGAGGCAGC CAAGGAAGCG
GAGCGCAAGC TGAACGAGGC CGAGGCGCGG GCCAACAAGA TCCACGATGT CGCGGACCGG
CGGCTCAAGC GCCTGGTGGC CACGCACGGG GAGGCGGTGC GCCGCCTCAA CGACATGCGC
GACACCCTGG CGGAGCTCCT CAAAGCCGAA GCCAAGGCCG GTGCGCTGGA CGCCGGGCTC
AAACGGTCCG ACTTCGAAGG CAGCACGGAC AAGGAGTCGG CCTCCGCGGC CTCGAGCAAG
CAGTCCTCCC CCCAGGCGGC GGAGCCCGAG GGTGCGGCCA ACGCCCAGCG TCCCGCTTCC
CCTGACAACG AGCCCACGGC CCGCCTCAAC CCGGCCGACA AGGAGCCCAC GGCCCGCCTC
AACCCGGCGA GCAGCGGAGC CGCGGCGGAT GGGAAGGCGG AGAACCAGGT GAAGAGCGCC
CCGGCCGCGC AGGGAGCGCG TCCCATTCCC GGGCGTCCTC AAGGGTTTCG TTACGCGGGT
CCAGCACCGA CTGACGCGGG CAGCTCTCCT ACGCCGCCGC CTCCGTCCAC GGAACTGACC
GGCGTGTACC AGGCGTCCGT GCCTGCAGAC TCCGCCAGCT CTGCGGACTC GGGAAGCTCC
GCCGGCTCCT CGAACGCGGG AAGCTCCGCG GGCTCCTCGG ATTCGGGAAG CTCGGGAGGC
TCAGACTCCT CCGGCGGCGG CTTCTAG
|
|---|
| Protein sequence | MNERIPEIFP NLLREDAFPT VRKGGYDKRQ VDDFVVRNHN QLRDLQERLA RAHDELEQLR
RELAEAKAKA AVKPEHEQIS ERLANILRIA EEEAADKRAQ VDKEVKEIRA KAEEEAKAKI
KSAQEQAERI VNGARDEAKE LLTSTKQEAE RLREEAAKEA ERKLNEAEAR ANKIHDVADR
RLKRLVATHG EAVRRLNDMR DTLAELLKAE AKAGALDAGL KRSDFEGSTD KESASAASSK
QSSPQAAEPE GAANAQRPAS PDNEPTARLN PADKEPTARL NPASSGAAAD GKAENQVKSA
PAAQGARPIP GRPQGFRYAG PAPTDAGSSP TPPPPSTELT GVYQASVPAD SASSADSGSS
AGSSNAGSSA GSSDSGSSGG SDSSGGGF
|
|---|
| |