| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0176 |
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| Symbol | |
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| ID | 3579754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 199389 |
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| End bp | 200111 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637683859 |
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| Product | putative short chain dehydrogenase |
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| Protein accession | YP_288237 |
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| Protein GI | 72160580 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.300232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGTGG CGCGCAGTGC CGACCGGCTC GCCGCGCTCG CCGCGGAGCT CACCGACCGC
TACGGCGTGC CCGCGCAGTG CCTGCCCGCC GATCTCACCG ACGACAAGGA CCTCGCCACG
GTCGAAGAGC GGCTGCGAGT CACCGGTGAC ACCGCTGACG CCCCGATCGA CCTGCTGGTC
AACAATGCCG GACAGGCGCA CGGCGGCGAT TTCGCGACGA TTCCGGTCAG CGCGATCGAG
GACACGCTCG CACTGAACAT CCGTGCGCTC ACCCGGCTGG CGCACGCGGT ACTCCCCGTG
CAGATCGAAC GGGCCCGCCA GCTCCGCGAG GCAGGGAGCT CCCGCCCGCT CGGCATGATC
AACGTGGCGT CCATGGCCGG ACTGCTGCCG GCCGCTCCCG GCGGCGCGGT CTACTCCGCG
TCCAAGGCCT ATGTGCTCTC CCTCACCGAC ACGCTCGCGG TCGAAGCGGC CCGGCACGGC
GTGCGGGTGA CCGCGGTCCT CCCCGGCTAC GTCCGCACCG ATATGACCCG GTCCTTGCAG
GAGAAAGGGG CGCCCGATAT CGCGTTCGTC CCGCGGGAGC GCGTGGTGAC CGACTCGCTG
CGCGGCTGGG CTTCGGGCCG GACCCGAGTC GTGCCGGGCG CCCAGTACAA GGCGGTCAAC
GCCCTGCTCC ATGCCCTTCC CCCAGGGCTG TTCCACGCGG TCGCAAAACG CACCAGTGCG
TGA
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| Protein sequence | MLVARSADRL AALAAELTDR YGVPAQCLPA DLTDDKDLAT VEERLRVTGD TADAPIDLLV
NNAGQAHGGD FATIPVSAIE DTLALNIRAL TRLAHAVLPV QIERARQLRE AGSSRPLGMI
NVASMAGLLP AAPGGAVYSA SKAYVLSLTD TLAVEAARHG VRVTAVLPGY VRTDMTRSLQ
EKGAPDIAFV PRERVVTDSL RGWASGRTRV VPGAQYKAVN ALLHALPPGL FHAVAKRTSA
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