More than 300 homologs were found in PanDaTox collection
for query gene Tfu_0176 on replicon NC_007333
Organism: Thermobifida fusca YX



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007333  Tfu_0176  putative short chain dehydrogenase  100 
 
 
240 aa  474  1e-133  Thermobifida fusca YX  Bacteria  normal  0.300232  n/a   
 
 
-
 
NC_014211  Ndas_5378  short-chain dehydrogenase/reductase SDR  52.1 
 
 
277 aa  222  4.9999999999999996e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  43.32 
 
 
258 aa  150  2e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  43.87 
 
 
255 aa  139  4.999999999999999e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  38.49 
 
 
250 aa  131  7.999999999999999e-30  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  37.99 
 
 
296 aa  124  1e-27  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  34.69 
 
 
259 aa  124  2e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  35.98 
 
 
252 aa  122  4e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  36.25 
 
 
253 aa  121  9.999999999999999e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  37.34 
 
 
263 aa  120  1.9999999999999998e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  38.15 
 
 
258 aa  120  3e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  35.95 
 
 
253 aa  115  6.9999999999999995e-25  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  38.59 
 
 
276 aa  115  8.999999999999998e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  35.8 
 
 
269 aa  114  1.0000000000000001e-24  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  35.19 
 
 
259 aa  113  3e-24  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  38.75 
 
 
264 aa  112  4.0000000000000004e-24  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  34.73 
 
 
250 aa  112  4.0000000000000004e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  35.62 
 
 
249 aa  112  4.0000000000000004e-24  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  36.55 
 
 
258 aa  111  8.000000000000001e-24  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  36.13 
 
 
258 aa  110  1.0000000000000001e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  37.33 
 
 
267 aa  111  1.0000000000000001e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  43.93 
 
 
262 aa  110  2.0000000000000002e-23  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  34.32 
 
 
282 aa  110  2.0000000000000002e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  36.13 
 
 
258 aa  110  2.0000000000000002e-23  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  36.13 
 
 
258 aa  110  2.0000000000000002e-23  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  36.82 
 
 
255 aa  110  3e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  38.63 
 
 
266 aa  110  3e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  35.29 
 
 
270 aa  110  3e-23  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  35.27 
 
 
259 aa  109  4.0000000000000004e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  36.73 
 
 
264 aa  108  6e-23  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  40.31 
 
 
262 aa  108  8.000000000000001e-23  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  34.31 
 
 
269 aa  107  1e-22  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  41.71 
 
 
261 aa  108  1e-22  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  34.98 
 
 
259 aa  107  1e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  41.14 
 
 
264 aa  107  2e-22  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  34.57 
 
 
254 aa  107  2e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_010655  Amuc_0363  short-chain dehydrogenase/reductase SDR  37.44 
 
 
281 aa  107  2e-22  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  38.25 
 
 
266 aa  107  2e-22  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  40.57 
 
 
260 aa  107  2e-22  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  35.95 
 
 
265 aa  106  2e-22  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  33.75 
 
 
269 aa  107  2e-22  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  34.85 
 
 
271 aa  107  2e-22  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  35.71 
 
 
270 aa  106  3e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  39.23 
 
 
275 aa  106  4e-22  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  39.89 
 
 
260 aa  105  5e-22  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  37.93 
 
 
259 aa  105  5e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  42.86 
 
 
262 aa  105  5e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  38.98 
 
 
259 aa  105  5e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  40.57 
 
 
264 aa  105  5e-22  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  36.18 
 
 
266 aa  105  5e-22  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  40.57 
 
 
260 aa  105  6e-22  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  41.14 
 
 
262 aa  105  9e-22  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_27130  short-chain dehydrogenase of unknown substrate specificity  35.34 
 
 
258 aa  104  1e-21  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  35.77 
 
 
266 aa  104  1e-21  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  42.35 
 
 
265 aa  104  1e-21  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  39.06 
 
 
259 aa  103  2e-21  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  33.91 
 
 
257 aa  103  2e-21  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  37.79 
 
 
266 aa  103  3e-21  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  34.84 
 
 
264 aa  103  3e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  35.81 
 
 
269 aa  103  3e-21  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  37.33 
 
 
266 aa  102  4e-21  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  37.7 
 
 
262 aa  102  5e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1841  short-chain dehydrogenase/reductase SDR  36.94 
 
 
266 aa  102  6e-21  Methylocella silvestris BL2  Bacteria  n/a    normal  0.197421 
 
 
-
 
NC_010803  Clim_0189  short-chain dehydrogenase/reductase SDR  32.39 
 
 
267 aa  102  7e-21  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00000709968  n/a   
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  35.83 
 
 
266 aa  102  7e-21  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  35 
 
 
281 aa  101  1e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  35 
 
 
281 aa  101  1e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  37.19 
 
 
265 aa  100  1e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  38.5 
 
 
283 aa  100  3e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  35.98 
 
 
264 aa  100  3e-20  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  36.65 
 
 
267 aa  99  5e-20  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  36.84 
 
 
275 aa  99  6e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  39.43 
 
 
265 aa  99  6e-20  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_009565  TBFG_12531  short-chain type dehydrogenase/reductase  35.71 
 
 
268 aa  98.6  8e-20  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00342881 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  33.18 
 
 
264 aa  98.6  8e-20  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  34.58 
 
 
266 aa  98.2  1e-19  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  41.14 
 
 
266 aa  97.8  1e-19  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  38.29 
 
 
258 aa  98.2  1e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  32.39 
 
 
259 aa  97.8  1e-19  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  38.86 
 
 
265 aa  98.2  1e-19  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  34.87 
 
 
258 aa  97.8  1e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  34.58 
 
 
267 aa  97.1  2e-19  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  32.19 
 
 
267 aa  97.4  2e-19  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  41.14 
 
 
270 aa  97.1  2e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  41.71 
 
 
269 aa  97.1  2e-19  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  32.66 
 
 
261 aa  96.7  3e-19  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  36.51 
 
 
264 aa  96.3  3e-19  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  34.69 
 
 
263 aa  96.3  4e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  35.19 
 
 
263 aa  95.9  5e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  27.16 
 
 
265 aa  95.9  5e-19  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  36.24 
 
 
258 aa  95.9  5e-19  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  34.75 
 
 
271 aa  95.9  6e-19  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  34.02 
 
 
287 aa  95.9  6e-19  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  38.86 
 
 
266 aa  95.5  6e-19  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  32.26 
 
 
261 aa  95.5  7e-19  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  35.56 
 
 
276 aa  95.5  7e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  27.57 
 
 
265 aa  95.5  7e-19  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  38.69 
 
 
266 aa  95.1  8e-19  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  32.34 
 
 
266 aa  95.1  8e-19  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  35.02 
 
 
263 aa  94.7  1e-18  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
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