| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4101 |
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| Symbol | |
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| ID | 3566717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4399999 |
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| End bp | 4401717 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637682573 |
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| Product | response regulator receiver:tetratricopeptide TPR_4 |
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| Protein accession | YP_287297 |
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| Protein GI | 71909710 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGA ACGCCAGCCC AACCAGCGGG GGGAGCCCGC TGGACAACGA AGAGATGCTG
CTCGTCCTGC AGCAGTCGTT GTCCAAGAAA CGTGTCCTGA TTGTCGACCG CCATTCGCCG
GCGCGGGATT CGATGCGCCT GATGCTCGGT GCGCTGGGTG TCACGATGGT GCATGGGGCG
GGCAATTCGG CGGAAGTGAT CCGTCAGGTC AAGGGTAATC GTTTTGACAT CATCCTGTCG
GATTTTGTCC TCGACGATGG GCGGGATGGT CAACAACTCC TGGAAGAACT GCGCCACGCG
CACCTGATTC CGCTGTCCAC GGTCTATCTG ATCATCACCA GCGAACGCAG CTACACCAAT
GTCGTGGCAC TGGCTGAACT GGCGCCGGAC GATTACCTGA TCAAACCGTT TACGGCGGAA
CAGTTGCAGG CCAGGTTGGT CAAGGCCGTC TACAAGAAGC ATGTGCTGCG CAAGATTTAT
GAGCAGATCG AAAACGGTGC GCTGCAGGAA GCGATTGCGG CCTGTGATCG CGTCATCCAG
CAGCAACCGG TTTACATGTA CGACGCACTG CGCTTCAAGG GGGAATTGCT GCACCAGCTT
GGGCGAACCA GCGAAGCCGA AGAAGTGTTC AGGCGGGTGC TTGAAGGGCG AGTCGTGCCG
TGGGCCAAGA TGGGACTGGC GATGGCCTTG CGCGATCGTG GCGCATTGGA TGAAGCCGAA
CAACTGGCCG AGCAGGTGAC GCAGGACACG CCGGAGTACC TGTCGGCTTA CGATTTTCTG
GCTTCGGTGC ACGAGGCCCA GGGGCGCCTG CATGAAGCCC AGAAAACGCT GCAGCGGGGC
GCCGATGCTT CGCCGCACAA CACGGTACGG CAACGCCTGG TCGGCGATGT CGCCGCCCGC
AACAAGGACC TGCTGGCGGC TGAAAAGGCT TATGGCAAGG TGATCGAGCG CAGTCGGGGC
TCCAGCCTGC GGACGGTGGA CGATTTTGCC AATCTTTCAC GGGTGCTGGT CGAGCGCGGT
GATGTGGCAG CTTCGCGCAA GATTGCCACG GAGATGAAGC GGGAGTGGCG CGGTGACAAG
CAGGCCGAGT TGGCCGCCAT GGTGACTGAA AGCCTGTGTC TGCATGCCGA AGGCGCGACC
GAGAAAGCCA GGAATTTGGT CGATCAGGCG CTGGCGCTGC AGAAAACCAT CGTTGCCGAG
GCGGTCGGGA AGGATCGCCA CACCTCGCAG CGACTGGCCG TCGATCTGGC GCATGCCTGT
TACGCCGCCG GGAAGGAAGA CGATGCGGGC CGGATCATGC GCCAGGTGGC CGCGGAAAAT
CACGAAGACC CGCACCTGAT CGACCATATC ACCAGCGTTT TCGAGAAAAC CGGCCAGCCC
GATGCCGGCA AGGCACTGCT CGATCAGGTC AGCAAGCAAA TCATCGATCT GAACAACAGG
GGCGTCATGG CGGCGCGCAG CGGCGATCTG GAAGGCGCGG TAAAACTGCT GATTCAGGCG
GCCGAGCAGG TGCCCAACCT GCAATTTCTG GTGAATGCTG CCAAGGCAAT CTTTACGCTG
ATGGACAAGA AGGGGTGGGA CAACGAACTG GCGGCCCGGG CGGTGGATTA TTTGCAGCGG
GCCCAGCGCA AGGATCGCAA GAGTGCCAAG GTGGCCTCGG CACGCGAGCT CTATGTTACG
GTAGCCAAGA AGTACGGTAT TGCGACCGAC AACACCTGA
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| Protein sequence | MTMNASPTSG GSPLDNEEML LVLQQSLSKK RVLIVDRHSP ARDSMRLMLG ALGVTMVHGA
GNSAEVIRQV KGNRFDIILS DFVLDDGRDG QQLLEELRHA HLIPLSTVYL IITSERSYTN
VVALAELAPD DYLIKPFTAE QLQARLVKAV YKKHVLRKIY EQIENGALQE AIAACDRVIQ
QQPVYMYDAL RFKGELLHQL GRTSEAEEVF RRVLEGRVVP WAKMGLAMAL RDRGALDEAE
QLAEQVTQDT PEYLSAYDFL ASVHEAQGRL HEAQKTLQRG ADASPHNTVR QRLVGDVAAR
NKDLLAAEKA YGKVIERSRG SSLRTVDDFA NLSRVLVERG DVAASRKIAT EMKREWRGDK
QAELAAMVTE SLCLHAEGAT EKARNLVDQA LALQKTIVAE AVGKDRHTSQ RLAVDLAHAC
YAAGKEDDAG RIMRQVAAEN HEDPHLIDHI TSVFEKTGQP DAGKALLDQV SKQIIDLNNR
GVMAARSGDL EGAVKLLIQA AEQVPNLQFL VNAAKAIFTL MDKKGWDNEL AARAVDYLQR
AQRKDRKSAK VASARELYVT VAKKYGIATD NT
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