Gene Daro_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4100 
Symbol 
ID3566716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4397646 
End bp4399868 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content67% 
IMG OID637682572 
Producthypothetical protein 
Protein accessionYP_287296 
Protein GI71909709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAT CACTGCATCG AATTTTTGCC GCGGCGGTCT TGATGATTGC GTTGCCTGCC 
TTGGCGCAGA GCGATCCGCC AGCCCGCGTC GGCCGCTTGG CCCATATCGA GAATGAGGTC
TTTTTTCGGG TAGACCGTAA CGATCAGGGG GGCGCGGCTA CGATCAACTG GCCTATCAGC
AGCGGAGCCA TCCTGGAAAC CGGGCGGCGT GGCCGGGCCG AGGTCTGGGT CGGATCAACA
GCCTATCGGC TGGCCGATGA GAGCCAGATC GAGTTTTCGC GAGTAGACGA CAGCCTGGTC
GATGTTCGCC TGAACGAGGG AAGCCTGGCC GTCACGGTGC TCGATCGGGA TCAGGCCGAC
GATGTCATGG TCGTGACGCC GGATGGCCAA GTGCGTTTCC AGACGCCGGG GCGTTACCGC
ATCGATGTCC TGGCCGATCA CTCCGAGCTG AGCGTGCAGG CCGGCCGGGC GACCTTCGAG
GATCGCCAGC GGGTAACGCC GGTGGCTGCG GGTCAGAAGG CGAGTCGCTG GCGCGACGGT
CGCGAGCAAC TCGATGGTGA CTGGGATCAG GATGCTTTCG ATCAATGGGT GGCCAACCGC
GAAAATGCCA CGCTGGCGGG TATGGCGCGT CGCCATGTAT CGCCCCACAT GACCGGCTAT
CAGGATCTGG ATGCCTATGG CGACTGGCGG ACGGCGCCCG ACTACGGCAC GGTCTGGTAT
CCACGGGCAG TGGCCGATGA CTGGGCCCCC TACCGCTATG GGCGCTGGGC CTGGGTTGCG
CCGTGGGGAT GGACCTGGGT CGACCAGGCT CCCTGGGGCT TTGCCCCCTT CCATTACGGC
CGCTGGGCGA TGATTCAGGG TCGCTGGGGT TGGGTGCCGG GGCGTCTTGT GCCGCGCCCG
GTCTATGCGC CGGCGCTGGT TGCCTGGATC GGTAATCCAG GCTGGAACGT CAGTTTCGGC
TTTGGCGCCG CCCCGGCCGT GGGCTGGTTC CCGCTGGCGC CGCGCGAGGT CTATGTGCCG
GGGCATCGTT ACACTCCCCA GTATGTCCGG CAGATCAATA TGGCCAATGT TCGCGATGTG
AACTTGATCG ATCGGGCAAT GCGTCCCGGA CCGCGCCAGC CGTTTGCTTA TAACGGTTTG
CCACGTGCGG TGACCGTGGT TCCCGCCCAT CTGGTTCGTG AAGGGCGGCC GATCACGGCC
CGCGAGATTA CGCCGCAGCA GCGTCAGGAA TTGGGTCGCG CACCGCTGGC CAGTCGCGCC
CCCAGCGCCG ATTGGCTGGC GCCGGCACCG GGGGCGGTAC GCTCGCATGA TGGCGAGCGG
CGTACCCTTG AGAGTCGCCA GCCGCGTCGC GACTTCGATG CACCAAGGCC GAATGGCCCG
GAACGTGGGG CGCCCCGCGG CGAGGTGATG CCACGCAATA CGGATCGCCC GGCATTCCGC
TCGCCGACGC CAGAGGCAAT CAATGGTCGC GGGAGTGAGT CGCGCCCCGA AGTCTTGCGC
CCCATGCCTG AACGTCGTCA AGAAAATGAA AACCGTGGCC GGCCAATCGA GGCAGCGCCA
GCCCCGGAGT CGATGCCGCG TGGCTTGCCA TCGCCGGAAA GACGCCAGGC AATGCCGGAG
GCCAGTCGTG AGCCAGTACC TGAATCGCGT CGCGAAAATT TCCGGCGACC GGAAGGTGAT
CCGCGCGGAC GTTCGCCAGA GCCCTTGCCC GTGCAGGTTC CGCAGCGTCG GGAAATGCCG
TCCCCGGAAG TCCGCCAGGC GGTACCGGAA GCGCCCCGTG TGCCGGCGGC CGAACCGCGT
CGCGAAATTC TGCGTCGGCC GGCCGAAACG GCACCCAGCG TCGAGCCACG GGGGCGCTCG
TTTGAGGCAG CGCCGGCGCC GGTCCCCATG CGCCGCGAGA TGCCGCCTCC GGAAGTGCGG
AGTGAGCCGC GCCAGCCGCA AGCAACGATG CGTCCGCCGG AACAGCGCCG TGATGCCGGT
GACTTCCAGC GCTTGGAACG ACCGATGCAG CGGGAAAGCA TGCCGCAGCC GATGCAGCGT
CAGCCGGAAA TGCCGCGCCC GGCACCACCT CCGGAGGTCC GGGCGCCAGC GCCGCAGCCG
ATGCCTCAGG CAGTGCAGCC ACCGCGGGTC GAGCCACCGC GACAGCCACC GGCTCCGCCG
GCGGGCGGCG GGCAGAACAA CGACCCGCGT CGCCGTCATG ACGACGAGCG CGGGCCGCGT
TGA
 
Protein sequence
MLQSLHRIFA AAVLMIALPA LAQSDPPARV GRLAHIENEV FFRVDRNDQG GAATINWPIS 
SGAILETGRR GRAEVWVGST AYRLADESQI EFSRVDDSLV DVRLNEGSLA VTVLDRDQAD
DVMVVTPDGQ VRFQTPGRYR IDVLADHSEL SVQAGRATFE DRQRVTPVAA GQKASRWRDG
REQLDGDWDQ DAFDQWVANR ENATLAGMAR RHVSPHMTGY QDLDAYGDWR TAPDYGTVWY
PRAVADDWAP YRYGRWAWVA PWGWTWVDQA PWGFAPFHYG RWAMIQGRWG WVPGRLVPRP
VYAPALVAWI GNPGWNVSFG FGAAPAVGWF PLAPREVYVP GHRYTPQYVR QINMANVRDV
NLIDRAMRPG PRQPFAYNGL PRAVTVVPAH LVREGRPITA REITPQQRQE LGRAPLASRA
PSADWLAPAP GAVRSHDGER RTLESRQPRR DFDAPRPNGP ERGAPRGEVM PRNTDRPAFR
SPTPEAINGR GSESRPEVLR PMPERRQENE NRGRPIEAAP APESMPRGLP SPERRQAMPE
ASREPVPESR RENFRRPEGD PRGRSPEPLP VQVPQRREMP SPEVRQAVPE APRVPAAEPR
REILRRPAET APSVEPRGRS FEAAPAPVPM RREMPPPEVR SEPRQPQATM RPPEQRRDAG
DFQRLERPMQ RESMPQPMQR QPEMPRPAPP PEVRAPAPQP MPQAVQPPRV EPPRQPPAPP
AGGGQNNDPR RRHDDERGPR