Gene Daro_3983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3983 
Symbol 
ID3567272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4280139 
End bp4281002 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content63% 
IMG OID637682456 
ProductHupH hydrogenase expression protein, C-terminal region 
Protein accessionYP_287180 
Protein GI71909593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGT CCACGATGCG TCCCTTTCCG ATTTCCGTCG TCGCCATGGG GCCTGGTTCG 
CAGGGCGACG AAACGCCGGA TTACCTGCCC ATGCCGAAGG GCATGGAAAC CTTTTCGCAA
CCGCGATTGC CGGATAACGT CGCGCCCGAG GTGGTCAATC GGGCGGCCAG CCTGCTCGGC
ACCTTTGCCG ATGAGGCCGA GAGGTTCGGT TTCGAAGGGG CGGCGAGGCT CGAGCTGCTC
GATCTCGACG CCACGATGCG CGACGTGATC AACCAGTCGA TGGGCTTTGG CGAGGTCAGT
GCCTTCACGA CTGCGCCGGC TCATTGGCGC GTTCAGGAAA CCGCCTTTTC CGGCCTGTGG
CGTGTCCTGA AGGTGGCCGA TGATGGCGCC ATGATGGTGG ACCACCTCGA AACCGGCAGC
GTTCCGGCGG TGCTGACCGA GGCCATGGTG AGCACGAGCA CGGCCGATCT GCCGCCGCCG
GACTATCCGG CTGGCTGCAT GAACGCCCAG GCCCTGGTCG AGGAAATCCG CATGCAGGCA
GCGGCCTGGA AAGCGGGCGA TTCAGCCCAT GTCATCAACC TGACGCTGCT GCCGGTCAGC
GATGCCGATC TCGATACGCT GTACGGCTGG CTCGGCCATC GCGAAGTCTC GATCCTGTCG
CGCGGCTACG GCAATTGCCG GATCACCAGC ACGCGTCTGA AAAATGTCTG GTGGGTCCAG
TACTTCAACA GCATGGATAC ACTGATCCTG AACTCCATCG AGATTGTCGG CATGCCCGAA
GTCGCGCTGG CGGCCGACGA GGATTTCAGC GATTCCGTCG AACGCCTGCG GGAATACCTC
GACATGATGG TGGAGCCAGT CTAA
 
Protein sequence
MNPSTMRPFP ISVVAMGPGS QGDETPDYLP MPKGMETFSQ PRLPDNVAPE VVNRAASLLG 
TFADEAERFG FEGAARLELL DLDATMRDVI NQSMGFGEVS AFTTAPAHWR VQETAFSGLW
RVLKVADDGA MMVDHLETGS VPAVLTEAMV STSTADLPPP DYPAGCMNAQ ALVEEIRMQA
AAWKAGDSAH VINLTLLPVS DADLDTLYGW LGHREVSILS RGYGNCRITS TRLKNVWWVQ
YFNSMDTLIL NSIEIVGMPE VALAADEDFS DSVERLREYL DMMVEPV