| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3944 |
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| Symbol | |
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| ID | 3567482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4240583 |
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| End bp | 4242652 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637682418 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_287142 |
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| Protein GI | 71909555 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 0.677577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTAA GAAAAAAGCT AATAAGTTCC TATTTTCTGG CGGCCGTGAG CAGCGTCGGA
GCACATGAGT CGGCTGAGCT TTCTACGGTC GAAGTGCGGG CCAAGGCCGA AAATCTGGAA
GGCATCGCCG CGTCCGGCAG TGAAGGTGTG GTTTCCAGCC AGCGCCTGGC GGCCGTGCCC
ATCCTGCGCC CCGGCGAGGC GCTGGAAATG GTGCCCGGCC TGATCGTTAC CCAGCACGCC
GGTGACGGCA AGGCCAACCA GTATTTTCTG CGCGGCTTCA ACCTCGACCA TGGTACCGAT
TTCGCCACTT ACGTCGGTGG CGTCCCGGTC AACATGCCGA CCCATGCTCA TGGCCAGGGC
TACACGGATC TCAATTTCCT GATTCCCGAG CTGGTCGATC GCATCAGCTT CCGCAAGGGG
CCGTACTTCG CTGAGGAAGG CGATTTCTCA TCGGCTGGCG CAGCGCATAT CGACTATTTC
CGCCAGATGG ATGCGTCGCT GGCGCAAATC ACGCTGGGCC AGAAGGGCTA TGTGCGCAAC
CTGTTGGCTG GCTCGCCGGA AGTGGGCCGC GGCAATCTGC TCTATGGTCT GGAATTGTTC
CATAACGACG GACCGTGGGA AGTGGCCGAG AATTACCGCA AGTTTAATGG CGTGCTGCGC
TATAGCCAGG GAACACGCAA CGACGGCTTT TCGCTGACCG GCATGGCCTA CCGGGGCCAA
TGGACGTCCA CCGACCAAAT TGCCCAGCGC GCCATCGACC GCGGGCAGGT CGGCCGCTTT
GGCACCCTCG ATTCGACGAC CGGTGGCGAG ACCAGTCGCT ACAGCCTGGC CGGTGAATGG
GCCAGGCGCT GGGCCAATGC CCAGACCAAG GCCAACGTCT GGTGGCTGAA GTCCAGCCTC
GATCTGTGGT CCAATTTTCA ATATTGCCTG AACGATGTCG CCCACAGTGG CACCTGTGAC
ACCGGCGACC AGTTCAAGCA GGGCGAGCGC CGTCAGTCGG GGGGCTTTGC GCTGTCGCAT
GCGATGTTCG ATCGCTGGGG CGCTTTCGAG GTCGAGAACA GCATCGGCCT GCAGAGCCGG
ATCGACCGTC TTAACCCGGT TGGTCTCTAC GCCACCTCGG CCCGGCAGAC CGTCGGCACT
GTCCGCGAAG ACAAGGTGAC CCAGCGCAGT CTGACGCTGT GGGGGCAAAA CGAAACGCGG
TGGACCGAGT GGTTCCGTTC GGTCCAGGGC TTGCGTGCCG ATGCCTACGA TTTCGACGTC
GAATCGAGCC TGGCTGCTAA TTCCGGCAAG GCCAGCGACC AGATGGTGAC GCCCAAACTG
GCGCTGATTT TCGGCCCGTG GCAGAAAACC GAGCTCTACC TGAATTACGG CCACGGCTTC
CATTCAAACG ATGCGCGCGG GACGACGATC AAGGTCGATC CAGCTGACGG CACGACGCCA
GTACAGCGCG TCAAGCCGTT GGTCCGCACC AAGGGTTACG AAGTGGGTGC GCGCAGCGAA
CCGGTCGCCG GCTGGCAATC GACGCTTGCC TTGTGGCAAC TCGATGCCGC CTCCGAACTG
CTCTTTGTTG GCGATGCCGG CACCACCGAA CCATCACGCC CGTCGCGCCG CTATGGCCTT
GAGTGGACCA ACCTCTATGT ACTCTCCGAT TGGCTGGCGA TCGATGCCGA CCTCGCCTGG
TCGCATGCCC GTTTCCGCGA TCAAGATCCG ACGGTCGGCG ACTACATTCC CGGTGCGGTG
GCGACGACTG CCAATATCGG CCTGACGTTC GATCACCTCG GCCCGTGGTT CGGGGCCTTG
CGCCTGCGCT ATTTCGGGCC GCGTCCGCTG ATCGAAGACA ACTCCGTGCG CTCCGGCAGT
TCGGCACTGA CCAACCTGCG TACCGGCTAC AAGATCGACC AGCGTACCCA GTTGACCCTC
GACGTCTACA ACCTGTTCGA TCGCAAGGAG AACGACATCG AATACTGGTA CGACTCGCAA
CTGCGGGGAG AGGGCACCTC GGCCAGCGAT CGCCATATTC ACCCTGCCGA ACCGCGTAGC
CTGCGCCTGA CCATCTCCCA TCGCTTCTAA
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| Protein sequence | MSVRKKLISS YFLAAVSSVG AHESAELSTV EVRAKAENLE GIAASGSEGV VSSQRLAAVP
ILRPGEALEM VPGLIVTQHA GDGKANQYFL RGFNLDHGTD FATYVGGVPV NMPTHAHGQG
YTDLNFLIPE LVDRISFRKG PYFAEEGDFS SAGAAHIDYF RQMDASLAQI TLGQKGYVRN
LLAGSPEVGR GNLLYGLELF HNDGPWEVAE NYRKFNGVLR YSQGTRNDGF SLTGMAYRGQ
WTSTDQIAQR AIDRGQVGRF GTLDSTTGGE TSRYSLAGEW ARRWANAQTK ANVWWLKSSL
DLWSNFQYCL NDVAHSGTCD TGDQFKQGER RQSGGFALSH AMFDRWGAFE VENSIGLQSR
IDRLNPVGLY ATSARQTVGT VREDKVTQRS LTLWGQNETR WTEWFRSVQG LRADAYDFDV
ESSLAANSGK ASDQMVTPKL ALIFGPWQKT ELYLNYGHGF HSNDARGTTI KVDPADGTTP
VQRVKPLVRT KGYEVGARSE PVAGWQSTLA LWQLDAASEL LFVGDAGTTE PSRPSRRYGL
EWTNLYVLSD WLAIDADLAW SHARFRDQDP TVGDYIPGAV ATTANIGLTF DHLGPWFGAL
RLRYFGPRPL IEDNSVRSGS SALTNLRTGY KIDQRTQLTL DVYNLFDRKE NDIEYWYDSQ
LRGEGTSASD RHIHPAEPRS LRLTISHRF
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