| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3882 |
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| Symbol | |
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| ID | 3567727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4175507 |
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| End bp | 4176643 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637682356 |
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| Product | pilus retraction protein PilT |
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| Protein accession | YP_287080 |
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| Protein GI | 71909493 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGCG ATCAGGCAAT GAAATTCATG CACGATCTTT TGCGCCTGAT GTCGCAAAAG
AAAGGCTCCG ACCTTTTTAT CACGGCTGGG TTTCCGCCGG CCATCAAGAT CGATGGCAAG
ATCACGCCAG TCTCGAACCA GATTCTGACG CCGCAGCACA CGGCCGAACT GGCACGCTCG
ATCATGAACG ACCGCCAGGC CTCCGAGTTC GAAGCGACCA AGGAATGCAA CTTCGCCATT
TCGCCGGCTG GCATTGGCCG CTTCCGGGTC AATGCATTGG TCCAGCAGGG GCGGGTTGGC
GTCGTTTGTC GGACGATCAA CATGAGCATC CCGACGCTCG ACGAACTGCA GTTGCCGCCG
GTTTTGAAGG ATCTGGCGAT GACCAAGCGC GGCCTGATCA TCTTTGTCGG CGGCACCGGC
ACCGGCAAGA CGACCTCACT GGCGGCGCTG GTCGATTATC GCAACGAGAA TTCCTACGGT
CACATCATCA CGATCGAGGA CCCGATCGAG TACGTCCATG ACCACAAGAA CTGCATCGTC
ACCCAGCGCG AAGTCGGGGT CGATACCGAT GACTGGGGTC CGGCGCTGAA GAACACGCTG
CGTCAGGCAC CGGACGTCAT CCTGATGGGC GAAATCCGCG ACCGCAACAC CATGGACTAC
GCCATCGCCT TCGCCGAAAC CGGCCATCTG GCACTCGCTA CGCTACACGC CAATAGTGCC
AACCAGGCGA TTGACCGCAT CATCAACTTC TTCCCGGAAG AGCGACGTCA GCAACTGTTG
ATGGACCTCT CGCTGAACCT GCGCGCCATG GTCTCGCAGC GCCTGATCCC GAAAAAGGAC
GGCAAGGGCC GGATGGCGGC GATCGAAGTG CTGCTCAACT CGCCGCTGAT TTCCGACCTG
ATCTTCAAGG GCGAGGTCCA TGAGATCAAG GAGGTCATGA AGAAATCCCG CGAACTCGGC
ATGCAGACTT TCGACCAGGC CTTGTTCGAC CTCTACGAGG CCGGCAAGAT CACCTACGAA
GATGCGTTGC GCAATGCCGA TTCGCTCAAT GATCTGCGTC TGCAAATCAA GTTGCACGGC
AAGGAATCCA AGGATCGCGA CCTGACGACC GGTATCGGCC ATCTGGATAT TGTCTGA
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| Protein sequence | MERDQAMKFM HDLLRLMSQK KGSDLFITAG FPPAIKIDGK ITPVSNQILT PQHTAELARS
IMNDRQASEF EATKECNFAI SPAGIGRFRV NALVQQGRVG VVCRTINMSI PTLDELQLPP
VLKDLAMTKR GLIIFVGGTG TGKTTSLAAL VDYRNENSYG HIITIEDPIE YVHDHKNCIV
TQREVGVDTD DWGPALKNTL RQAPDVILMG EIRDRNTMDY AIAFAETGHL ALATLHANSA
NQAIDRIINF FPEERRQQLL MDLSLNLRAM VSQRLIPKKD GKGRMAAIEV LLNSPLISDL
IFKGEVHEIK EVMKKSRELG MQTFDQALFD LYEAGKITYE DALRNADSLN DLRLQIKLHG
KESKDRDLTT GIGHLDIV
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