| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3868 |
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| Symbol | |
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| ID | 3567752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4158680 |
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| End bp | 4160233 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637682342 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_287066 |
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| Protein GI | 71909479 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.891545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGCC ACCCGAAGCC AAATATCGCG TCCATGAACG ACCCAAAACA GCCCTCAGAT
ATTGCGCGGG AAGCGCTAAA GCGCCTTGCT GTTCGTCACT TGCAGCCGAC GCCTGCCAAT
TATCAGGCGT GCTACAACGA AATCGCCGGT ATTCCGAACA TCCTTCCTTT TCCCGAAGTG
CCGTTGCGCC ACTTGGCGAC TCAATTGTCG CCGCGCAATA AGCGGCAGCA GCAATCGCTC
GATTTGCTCG ACTCGGCGAT TGGTCGGCGT AGTTGGCAGT GCGTTACCGA TGCGTTGAAT
ACTTTTGCCC AGGCTGGCGT TGTGTCGCCA CCCGCCGAAC CAGCCTCCTC GTCGGTGGAG
TCGTTGCCTG GCGAGTTTGC CAGCAAGCTC GCCCGTCTTG TTGAGGGCGT GTTGCCTGCG
CTGGGCGACG ATAATTCGCG GGTGGCCGGA ATGGCCAATG AATTGCTGTT GATGCTCAAG
CAGACGACGG TCGAGCTAAC TTCCGTTCAG GAGCTTCTGG CCAATCTGGC TTACCAGATG
TGCGCTGCTG CCGAGGAGCA GGTCGAGATC AAGGGGGCCC TGCTCAAGCT CTTGCACATG
ATCATCGAGA ATATCGGCGA GCTGAGTGTT GATGACAGCT GGTTCAAGGG GCAGATCGAT
GGTCTTCTGG CGGCGGTTGC CCCGCCGTTG ACGCTGCGTC ATCTCGATGA GATGGAGCGC
CGCTTGCGCG ACGTGATGGA AAGGCAGGGG CGCGCCAAGT CGCGTTCTGT CCAGGCGCAG
GCTGAAATGC GTCATATGCT GGCTGAGTTC ATCGAGCGAC TGGCGACCAT GAACCGTTCG
AGCAGCGAGT TCGAGGGGCG TATCGAGGAA AGTGCGCGCC AGATCGAGAG AGTCTCTAGC
GTTGATGATT TGAGGCCCTT GCTTGATGAT GTGATCAGGG CGACGCATGC GATGGCCGAA
GAAACCGCGC AATCCCGCGA GCAATTGAAA ACGCTGCAGG ATAAGGTGTT GATTACTGAA
TCGGAGCTGA TGCAGTTGCA TCAGGAGCTG GATAACGCCA GTGCCCTGGC CCGCCACGAC
CCGCTGACCG ATGCCTTGAA CCGCAAGGGG CTGGACGAGG CTCTGGCGCG CGAGGTTTCC
AGCATGCGGC GCAAGGATTT GCCCCTGTCG ATCAGTTTGC TTGACGTCGA TAATTTCAAG
AAACTCAATG ACCGGCTCGG TCACGATGCC GGCGATGGGG CCTTGATCCA TCTGGCGGAC
GTTACGCGGA GCAACATGCG ACCGAGTGAT ACGCTGGCCC GCTACGGTGG CGAGGAATTC
GTCGTCCTGA TGCCGGATAC GACCCTGGAG CAGGGTATTG AGGCGATGAC CCGTCTGCAG
CGCGAGCTCA CCAAGGCGAT CTACCTTTCG GGTAATGAAA AGATACTGAT CACGTTCAGT
GCCGGGGTGG CTCAGCTGGC ACCTGATGAA ACCGGTACCG ATGCCATCCG GCGAGCCGAT
CAGGCCATGT ATCTGGCCAA GCGCTCCGGC AAGAACCGGG TCATGGGGGG CTGA
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| Protein sequence | MSRHPKPNIA SMNDPKQPSD IAREALKRLA VRHLQPTPAN YQACYNEIAG IPNILPFPEV
PLRHLATQLS PRNKRQQQSL DLLDSAIGRR SWQCVTDALN TFAQAGVVSP PAEPASSSVE
SLPGEFASKL ARLVEGVLPA LGDDNSRVAG MANELLLMLK QTTVELTSVQ ELLANLAYQM
CAAAEEQVEI KGALLKLLHM IIENIGELSV DDSWFKGQID GLLAAVAPPL TLRHLDEMER
RLRDVMERQG RAKSRSVQAQ AEMRHMLAEF IERLATMNRS SSEFEGRIEE SARQIERVSS
VDDLRPLLDD VIRATHAMAE ETAQSREQLK TLQDKVLITE SELMQLHQEL DNASALARHD
PLTDALNRKG LDEALAREVS SMRRKDLPLS ISLLDVDNFK KLNDRLGHDA GDGALIHLAD
VTRSNMRPSD TLARYGGEEF VVLMPDTTLE QGIEAMTRLQ RELTKAIYLS GNEKILITFS
AGVAQLAPDE TGTDAIRRAD QAMYLAKRSG KNRVMGG
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