| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3834 |
|---|
| Symbol | |
|---|
| ID | 3568193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 4124636 |
|---|
| End bp | 4125523 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637682308 |
|---|
| Product | regulatory protein, LysR:LysR, substrate-binding |
|---|
| Protein accession | YP_287032 |
|---|
| Protein GI | 71909445 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 0.381515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCATTCA ATAATGAAAG CACAGAGGCG GCCATGGAAT GGAGTGATTT GCGTGTCTTT
CTCGCCATTG CCCGTGTCGG CACACTCGGC GGTGCCGCTC GTCTTTCCGG GCAATCGCAA
CCCACGATGG GGCGACGCCT ACGCGCCCTT GAAGCCGCGC TAGGCTGCGC CCTCTTCCAG
CGAACGAATG ATGGTTTTGT CCTGACCGAT GAGGGACAGT CCTTGTTGCC GCACGCTGAG
CATATGGAAG AAGCTGCGCT GGCATTACAG CGAAAGTTGG CTGGCCAGCC AGGAACTTTG
CACGGGCAAC TGCGCATATC AGCCTCCGAC TGGTTTGGTG CCCATGTGCT GAGTCCACTC
ATCGCGGATT TTCGTCGAGA GCATTCCGGG ATCAGCGTCG AACTGATCAC CGACAGTCGC
CTCTATAGCC TTGCCCGCCG AGAGGCTGAC GTTGCTTTCC GAATTAAACC CTTTGAGGAA
CCGGATGTAA TTCAGCGCAA GTTGATGCAT ATGGAATACG CGCTATACGC GGCGCCATAC
TTGCCGGCGC CCCAAGCCGG TGACGGCAAA GGCTGCTCGC TAATCACCAT GGATTCCGCC
TACGCTGAAA TACCAGACGC ACGCTGGTTA CGTAAGTTGC TGCCGAACTC AAGCATTGGA
TTTGCCAGCA ACAGCAGGGA AGCTCAAGCA ACACAATGTA TGTCAGGCGG TGGAATCGCT
GTATTACCCT GCCTTCTGGG AGATCGCATT CCAACAATCC AGAAACTGGA TTTAGGCGAG
AAAGCGCCAG GGAGAGATGT GTATCTCGGC TATCACAAAG ACTTGCGCCA CTTGGGGCGA
CTCCGAGTTT TCCTCGATTT CGTTTCGCAT CGCCTGAGCA GCAACTGA
|
|---|
| Protein sequence | MPFNNESTEA AMEWSDLRVF LAIARVGTLG GAARLSGQSQ PTMGRRLRAL EAALGCALFQ
RTNDGFVLTD EGQSLLPHAE HMEEAALALQ RKLAGQPGTL HGQLRISASD WFGAHVLSPL
IADFRREHSG ISVELITDSR LYSLARREAD VAFRIKPFEE PDVIQRKLMH MEYALYAAPY
LPAPQAGDGK GCSLITMDSA YAEIPDARWL RKLLPNSSIG FASNSREAQA TQCMSGGGIA
VLPCLLGDRI PTIQKLDLGE KAPGRDVYLG YHKDLRHLGR LRVFLDFVSH RLSSN
|
|---|
| |