| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3468 |
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| Symbol | |
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| ID | 3567336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3717609 |
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| End bp | 3718748 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637681940 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_286667 |
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| Protein GI | 71909080 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 0.242566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.43397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA ACGCCGGTCA AGACGATCCC TGGGCCAAAT GGCGCAAGCC GGAAGTCCCC
GCTGCGGTCG AGGCTGAAAC CAAGCCGAAA GCCAAACCGG TTGAAGCGGT AGAGGCTGCG
GCGCCGAGCG AGGCTGCAGT CAAGCCGGAA GGAACCCTGG GGGTACGGAA GTCGGCGACG
GTAGCCGAGC GTCCGGGTCA CCGCAAGCCG ATCCGGGGTG GTGCCGTGCC GAAGCGGACG
ACCATGGCGG ACAAGGTGGC GATCGCCGAG CGCTTGGCAG ACAAGCCGGC GCGATCGGCG
ACTGCCAAGA CGCGCGCTGA TGCGCCACGT GAAAATCCGT GGAAGAAGGC CGCGCCTGTA
CCTCCGTCAC GAACCCCCGC GGTGGCCGCG AAGCCGCCTG GGCCAAGCCC GGAAGGCGTC
CGGCTTTCCA AGGTGATGTC CGAGCGCGGC ATGTGTTCGC GCCGCGAGGC CGATCTGTGG
ATTGAGCGTG GCTGGGTGTT TGTCAATGGC GAGCAGGTCA GCGAGCTGGG TTCGCGGATC
GACCCATCGG TATCCGAGAT CACCGTTTCG CAGGAAGCCA AGAAGGATCA GGCCAAGGCG
GTCACCATTC TGCTGCACAA GCCGGTCGGT TATGTGTCCG GACAGCCCGA GCCGGGTTGT
ATTCCGGCGG TGACCTTGAT TACGGCGGAA ACGCAGGTCG AGCAATCGGG TGGTCCGGAA
TTCAAGCCGT GGATGTTGCG TGGTCTGGCG CCGGCCGGTC GCTTGGACAT CGATTCGACC
GGCTTGCTGG TGTTGACCAG CGATGGTCGT GTCGCCAAGC GCCTGATTGG CGAGGATAGC
GAGGCAGAGA AGGAATATCT GGTTCGTGTT TCCGGCGAAA TGATCAAGGG TGGTCTGGAC
TTGCTGCGCC ATGGTTTGGA ACTTGATGGC AAGCCGTTGA AGCCGGCTTG GGTCAAGCAG
TTGAACGAAG ACCAGTTGCA CATCATCCTG AAGGAAGGCA AGAAGCGCCA GATTCGCCGC
ATGTGCGAAC TGGTTGGTTT GCAAGTGATC GGCCTGAAGC GGGTGCGCAT CGGGCGGATC
AGGCTGGGCG ATTTGCCGAT GGGGCAATGG CGCTTCCTGC GGGCTGACGA GGCGTTCTGA
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| Protein sequence | MSDNAGQDDP WAKWRKPEVP AAVEAETKPK AKPVEAVEAA APSEAAVKPE GTLGVRKSAT
VAERPGHRKP IRGGAVPKRT TMADKVAIAE RLADKPARSA TAKTRADAPR ENPWKKAAPV
PPSRTPAVAA KPPGPSPEGV RLSKVMSERG MCSRREADLW IERGWVFVNG EQVSELGSRI
DPSVSEITVS QEAKKDQAKA VTILLHKPVG YVSGQPEPGC IPAVTLITAE TQVEQSGGPE
FKPWMLRGLA PAGRLDIDST GLLVLTSDGR VAKRLIGEDS EAEKEYLVRV SGEMIKGGLD
LLRHGLELDG KPLKPAWVKQ LNEDQLHIIL KEGKKRQIRR MCELVGLQVI GLKRVRIGRI
RLGDLPMGQW RFLRADEAF
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