Gene Daro_3447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3447 
Symbol 
ID3567852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3697142 
End bp3698947 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content62% 
IMG OID637681919 
Productglutaminyl-tRNA synthetase 
Protein accessionYP_286646 
Protein GI71909059 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00440] glutaminyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.183021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGCC CCAACCAGCC CGCCAACACC CCGGCCCCCG CCGCCAATTT CATCAAGAAC 
ATCGTCGAAG CCGACCTCGC CGCCGGCAAG CACGCCCAGC GCCACTGGGC CGGCCATCCG
GGTACGGCGG CCGACCACGC TGCCGCCCCC CTCGATCCGG CCAAACTGCG TACCCGCTTC
CCGCCCGAGC CGAACGGCTA CCTGCATTTC GGCCACGCCA AGTCCATTCT GCTCAATTTC
GGCCTTGCCG AGCAATACGG CGGCCGCTGC CACCTGCGCT TTGACGACAC CAACCCCGAG
AAGGAAGATC AGGAGTACGT CGACTCGATC GTCGATGCGG TCAAATGGCT CGGCTGTTCG
TGGGAAAAAG ACGGCGAAGC CAACCTTTAC TACGCCTCGA ATTACTTCGA CTGGATGTTG
CAATGCGCCG AGGCGCTGAT CGCCGCCGGC CACGCCTATG TCGATAGCCA GAACGCCGAA
GAAATGCGCG CCAACCGCGG CACGCTGACC CAGCCCGGCA AGAATTCGCC TTTCCGCGAC
CGTTCCGTCG CCGAGAACAT GGATCTGTTC AAGCGCATGC AGGCCGGCGA ATTTGCTGAT
GGCGCCCATA TCCTGCGCGC CAGGATCGAC ATGGCTGCGC CGAACATCAA CCTGCGCGAC
CCGGCCATCT ACCGCATCCG CCACGCCACG CACCACAACA CTGGCGACAA GTACTGCGTC
TATCCGATGT ACACCTTCGC CCATCCGATC GAGGATGCGC TGGAGAACAT CACCCATTCG
ATCTGCACGC TGGAATTCGA AGACCAGCGC CCGTTCTACG ACTGGCTGCT CGAGCGCCTG
GCTGAAGCCG GCCTGTTGCA GCGCCCGCTG CCGCAGCAGA TCGAGTTCTC GCGCCTCAAC
CTGACCTACG TCGTGCTCTC CAAGCGGAAA CTCATTCAGC TGGTTGAGGA AAAACACGTT
ACCGGCTGGG ACGACCCGCG TATGCCGACG CTGGTCGGCG CCCGTCGTCG CGGCTATTCG
GCCGAAGGCT TCCGCCTGTT TGCCGACCGC ATCGGCGTTT CCAAGAACGA CTCGCTGATC
GACTACGTGC TGTTCGAAGA CGCCATGCGC GAAGTGATGA ACGAGTCCGA TCTACGCCGT
ATCGCGGTAC TCGATCCAGT CAAGCTGATC ATCGACAATT ACCCGGATGG CCAGGTCGAA
GAGTGCTTCG CGCCGAATCA CCCGCTGCAC CCCGAACTTG GCCAGCGCAG CATCCCGTTC
AGCCGTGAGT TGTGGATCGA AGGTGAAGAC TTCATGGAAG TGCCGAGCAA GGGCTTCCGC
CGCCTGTTCC CCGGCAACAT GGCGCGCCTC CGTTACGGCT ACGTGGTCGA GTGCACCGGC
TGCGACAAGG ATGAAAACGG TAAGGTCATC GCCGTCCATT GCAACTACCT GCCGGAAACC
AAATCCGGCA CGCCAGGCGC CGACAGCGTC AAGGTTAAGG GCAATCTGCA CTGGGTCTCT
GCCGCCCAAT CCTATCAAGC CGAAATTCGC CTCTACGAGC GCCTGTTCAA GGTGCCCGCC
CCCGGCGCCC GGCGCGAAGG CGATGCGCCC GATCTGGAGC GCGATTTCCT CGACGACATG
AATACGGATT CCGCCAAGAC CATCACCGCC CAGCTCGAAC CCTGTCTGCG CGATGCCAAG
CCGGAAGAGC GCTTCCAGTT CGAACGACAC GGCTACTTTG TGGCCGACCG CGTTGACTCC
AAGCCTGGCG CCCCGGTCTT CAATCGGGCC GTCACCTTGA AGGATTCGTG GGGCAAGGCG
AGCTAA
 
Protein sequence
MSSPNQPANT PAPAANFIKN IVEADLAAGK HAQRHWAGHP GTAADHAAAP LDPAKLRTRF 
PPEPNGYLHF GHAKSILLNF GLAEQYGGRC HLRFDDTNPE KEDQEYVDSI VDAVKWLGCS
WEKDGEANLY YASNYFDWML QCAEALIAAG HAYVDSQNAE EMRANRGTLT QPGKNSPFRD
RSVAENMDLF KRMQAGEFAD GAHILRARID MAAPNINLRD PAIYRIRHAT HHNTGDKYCV
YPMYTFAHPI EDALENITHS ICTLEFEDQR PFYDWLLERL AEAGLLQRPL PQQIEFSRLN
LTYVVLSKRK LIQLVEEKHV TGWDDPRMPT LVGARRRGYS AEGFRLFADR IGVSKNDSLI
DYVLFEDAMR EVMNESDLRR IAVLDPVKLI IDNYPDGQVE ECFAPNHPLH PELGQRSIPF
SRELWIEGED FMEVPSKGFR RLFPGNMARL RYGYVVECTG CDKDENGKVI AVHCNYLPET
KSGTPGADSV KVKGNLHWVS AAQSYQAEIR LYERLFKVPA PGARREGDAP DLERDFLDDM
NTDSAKTITA QLEPCLRDAK PEERFQFERH GYFVADRVDS KPGAPVFNRA VTLKDSWGKA
S