Gene Daro_3396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3396 
Symbol 
ID3567126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3647791 
End bp3648510 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content57% 
IMG OID637681868 
ProductABC transporter related 
Protein accessionYP_286595 
Protein GI71909008 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCTG CTGTTTCCAT CGTCGACGTC GTCAAGCATT TCGGTTCACT ACAAGCACTG 
GCCGGGGTGT CGCTTGATAT CGAACAAGGT GAGTTTTTCG GATTGCTTGG CCAGAACGGT
GCCGGCAAGA CAACGCTGAT TTCCTCGCTG GCCGGTTTGG TGCGACCCGA TTCCGGAACG
CTGAAAGTGC TTGGTCATGA CGTGATCAAG GATTTTCGCG AGGCGCGCCG TTTGCTGGGC
GTGGTGCCCC AGGAACTGGT TTTCGATCCG TTTTTCAATG TCCGCGAAAC CCTGCGCATT
CAGTCCGGCT ATTTCGGTAT CCGCAATAAC GACGACTGGA TTGATGAGAT TCTTGCGAAC
CTTGACCTGA CCAGCAAGGC GAACGTCAAC ATGCGCCGCC TTTCGGGTGG TATGAAACGG
CGGGTGCTGG TTGCCCAGGC GCTGGTGCAC AAGCCTCCAG TTATCGTCCT CGACGAGCCG
ACCGCCGGCG TCGACGTCGA GTTGCGGCAA GGCTTGTGGC AGTTTATTCG TCGCCTGAAC
GGCGAAGGAC ACACGATCAT CCTGACCACC CATTATCTGG AAGAGGCGGA AGCTCTGTGC
AACCGCATCG CGCTGATGAA GCAGGGCAAG ATCGTCGCGC TGGACACGAC GGCCAACCTG
ATGGCGGCTC ATCCGGGTGG AACACTAGAG GATGTCTTTG TTCGGGCGAT GAACCAATGA
 
Protein sequence
MIPAVSIVDV VKHFGSLQAL AGVSLDIEQG EFFGLLGQNG AGKTTLISSL AGLVRPDSGT 
LKVLGHDVIK DFREARRLLG VVPQELVFDP FFNVRETLRI QSGYFGIRNN DDWIDEILAN
LDLTSKANVN MRRLSGGMKR RVLVAQALVH KPPVIVLDEP TAGVDVELRQ GLWQFIRRLN
GEGHTIILTT HYLEEAEALC NRIALMKQGK IVALDTTANL MAAHPGGTLE DVFVRAMNQ