Gene Daro_3358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3358 
Symbol 
ID3568313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3616089 
End bp3616856 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content58% 
IMG OID637681830 
ProductBeta-lactamase-like 
Protein accessionYP_286557 
Protein GI71908970 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAC GTGTACTCGG TTGCAGCGGC GGCATTGGCG GCAGGCACCA GCGAACCACT 
TCGTTTCTGG TCGATCACGA TATCCTGATC GATGCCGGTA CCGGGGTGGG CGAATTGTCG
ATAGCCGAAA TGGCGGCCAT CGACCACGTC TTCCTGACCC ACGCCCATCT CGACCATATC
GTTTCGCTGC CGTTGATGAT CGACTCCGTT GGCGATCGTC GACGCAAACC GTTGATGGTC
TATGGCACTC AGGCGGTGCT CGATACGCTT CGGCAACACA TTTTCAACTG GTCCATCTGG
CCGGATTTTT CGGTCCTGCC CCGTGCCGAT CAGCCGTTCA TGCGCTACCA GACCATTGAA
ACGGGTGCCA CTGTCACCCT TGGCGATCGT GGCATCAGCG CACTGCCGGT CGATCATACC
GTGCCCGCAG TCGGTTACTG CCTCGATTCG GGGGCCGCGA GCCTGGTCTT TTCCGGCGAT
ACCGGACCCT GCGATGCCTT CTGGCAGGGG CTCAATCGTC TCGATAATCT GCGTCATCTG
ATCATCGAGT GCGCCTTCTC CAATCAAGAG CAGGGCCTGG CGGAAGCCTC CAAGCATTAT
TGTCCGACCC TGCTGGCTGC GGAACTCCGA AAACTGGAGC GCAGTTGCGA AATCCACATC
ACCCATCTTA AGCCGGGGCA GATCGAGACA ACCATGGCGG AAATCGGAAG CTGCCTGGGG
GATTTTGACC TGAGCATGTT GCAGAATGAT CAGGTTTTTG AGTTCTGA
 
Protein sequence
MKLRVLGCSG GIGGRHQRTT SFLVDHDILI DAGTGVGELS IAEMAAIDHV FLTHAHLDHI 
VSLPLMIDSV GDRRRKPLMV YGTQAVLDTL RQHIFNWSIW PDFSVLPRAD QPFMRYQTIE
TGATVTLGDR GISALPVDHT VPAVGYCLDS GAASLVFSGD TGPCDAFWQG LNRLDNLRHL
IIECAFSNQE QGLAEASKHY CPTLLAAELR KLERSCEIHI THLKPGQIET TMAEIGSCLG
DFDLSMLQND QVFEF