| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3300 |
|---|
| Symbol | |
|---|
| ID | 3567167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 3549237 |
|---|
| End bp | 3550490 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637681773 |
|---|
| Product | EAL |
|---|
| Protein accession | YP_286500 |
|---|
| Protein GI | 71908913 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.220663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAAG CCGCCGCCGA CCAGCTTTTT CTCGGAAGAC AGGCCATTCT GGACCGAGAA
CAGCGGCTGC ACGCATACGA ACTGCTGTTC CGCAATGGCA GTCGCAACTT TGCCGAGGTC
ACCGATGGCG TTCAGGCAAC GGCTACCGTC ATTGCCAATG CGTTCACTGA ACTTGGCATC
GAGGCGGCCC TCGGCCAGCA TCGCGGCTTC ATCAACGTCG ATGAGCAGTT CCTGTTCAGC
GATATGCTCG AGTTACTGCC GCGCCACGCT GTGGTGCTGG AAATTCTGGA AACCGTGCCA
CCGAGCGATG CCGTTATCGA ACGCTGCAAG GCCCTGAAAG CCGCCGGCTT CACGCTGGCC
CTCGACGACG TCATCCAGCT GGAACCACAG TTCGCCGAAT TGCTGGCCCT GGTCGAAATC
GTCAAGGTCG ACATCCAGCC GCTTTCCCGC GTCCAGCTGA TGCAACTGGT CATGAAGCTG
AAGCCGATGG GCAAGCAGCT GCTGGCCGAA AAAGTCGACT CCCGCGAGCA AATGGAGCAA
TGCCTGAAGC TGGGCTTCAC CTTGTTCCAG GGCTATTACT TCGCCAAGCC GACCATCATC
GCCGGCAAGA AACTGGATCA CTCGCAGCTG TCGTTAATGA AACTGATGGG TCTGCTGCTC
GGTGACGCCG ACACCAGCGA ACTGGAAGCC GCGCTGAAGC CGGAACCGGG GCTGACCGTC
AATCTGCTGC GCATGACCAA CTCGGTCGGC GCCGGGGGCA CCGAACGCAT TACTTCGCTG
GGGCACGCCA TCACCGTACT CGGTCGGCGC CAACTGCAGC GCTGGCTGCA ACTGCTGGTC
TTCGCCTCCG GCGGCCAGAG TCCAACCGAA AATCCGCTGC TGCAGATGGC TGCCACCCGT
GGTCGCCTGA TGGAATTGCT GGCCGGCGAG TTGAGCCCGG GCGATAACGC GCTGGCCGAC
CGGGCCTTCA TGGTGGGCAT CATGTCGCTG ATGCCCGTTC TGGTCGGACA GCCGATTGCC
GATATCGTCG CCCCGCTCGG CCTGGCGACC GATGTTCGCG ACGCGCTGTG CGCGGGCAGC
GGCCCCTTGG GCGCCCTGCT CCGCATCGCC GAGAGCAGCG AAAACGGCAA CCTGGCCGAA
CTCGCCACCG CGCTGACAGA GCTGCCGGGT CTTGGCCCGA AAGCCATCAA CCGCGCGCAA
ACCCAGGCTC TGCAATGGGC CAACGAAATC GGCCAGGAAA AACCCGAGCA ATAA
|
|---|
| Protein sequence | MNEAAADQLF LGRQAILDRE QRLHAYELLF RNGSRNFAEV TDGVQATATV IANAFTELGI
EAALGQHRGF INVDEQFLFS DMLELLPRHA VVLEILETVP PSDAVIERCK ALKAAGFTLA
LDDVIQLEPQ FAELLALVEI VKVDIQPLSR VQLMQLVMKL KPMGKQLLAE KVDSREQMEQ
CLKLGFTLFQ GYYFAKPTII AGKKLDHSQL SLMKLMGLLL GDADTSELEA ALKPEPGLTV
NLLRMTNSVG AGGTERITSL GHAITVLGRR QLQRWLQLLV FASGGQSPTE NPLLQMAATR
GRLMELLAGE LSPGDNALAD RAFMVGIMSL MPVLVGQPIA DIVAPLGLAT DVRDALCAGS
GPLGALLRIA ESSENGNLAE LATALTELPG LGPKAINRAQ TQALQWANEI GQEKPEQ
|
|---|
| |