Gene Daro_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3114 
Symbol 
ID3568165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3356929 
End bp3357738 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content65% 
IMG OID637681585 
Productglutamate racemase 
Protein accessionYP_286314 
Protein GI71908727 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGC CCCGGGGAAT CCTTCTGAAC AACCAGCCCA TCGCCGTTTT CGACTCCGGC 
CTCGGCGGCC TGACGGTATT GCGCGCTTTG CGCGATCGAT TGCCGCAGGA AGACTTTTTC
TATTTTGCCG ATACCCGGTT TTTGCCTTAT GGCGACCGGC CGGAGGTGTT TCTTCGCGAG
CGTGGGGTCT TGATTGCCAA GGCGCTGGCC AAGCAAGGGG CAAAAGCCCT AGTCATTGCC
TGCAACACGG CGACAGCGGC TGCCGCGGAG GCGATTCGCG CGGCGATTGA TTTACCGGTG
GTGGCGCTGG AGCCGGGGGT TAAGCCGGCG GTGGCGCTGA CCAGGAGTGG TGTCATTGGC
GTGCTGGCGA CGACACGGAC TTTGGCGAGC GAGCGCTTTC AGCGGCTGGT TGGCAATCAT
GCCAATCATC TGCGCGTGAT CGCCCAGGCT TGCCCTGGGC TGGCCGAGGC GATTGAGGCA
CAGGGGCCGG ATAGCCCACA GGTAGCGGCC TTGCTTGATG CTTTTGTGAC GCCCCTGGCT
GCGGCGGACG CTGATGTCGT GGTGCTCGGT TGCACCCATT ACCCGTGGGT CGCTGGGGCG
ATTGCCCGGC GCATGCCGGT CGGGACAAGC TTGCTCGATA CCGGCGAGCC GGTGGCCCGC
CAGCTGGAAC GACTGCTGGC GGCCAGTCAT CTGCTCGGTG GCGGACATGG TCGGCTGACG
GTAGCGACGA GCGGCGCGCC GGCCGCGGTG AGTGCCACGG TTGAGCGTCT GTGGGGGGCG
AACCTTCACG TTGAACACTG GGAGCCCTGA
 
Protein sequence
MPAPRGILLN NQPIAVFDSG LGGLTVLRAL RDRLPQEDFF YFADTRFLPY GDRPEVFLRE 
RGVLIAKALA KQGAKALVIA CNTATAAAAE AIRAAIDLPV VALEPGVKPA VALTRSGVIG
VLATTRTLAS ERFQRLVGNH ANHLRVIAQA CPGLAEAIEA QGPDSPQVAA LLDAFVTPLA
AADADVVVLG CTHYPWVAGA IARRMPVGTS LLDTGEPVAR QLERLLAASH LLGGGHGRLT
VATSGAPAAV SATVERLWGA NLHVEHWEP