Gene Daro_3111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3111 
Symbol 
ID3568162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3353475 
End bp3353999 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content62% 
IMG OID637681582 
ProductTonB, C-terminal 
Protein accessionYP_286311 
Protein GI71908724 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGGA CCGATTACCG GCTTTTTGCG GCGCTGGCGC TGTCCGTCAC GCTGCATTTG 
TTGCCACTTT TGCCATATTT CATCACCCAT CCAGCCCAGC CCGAAAGTGC CCGACCGCTG
CAAGCGGAAC TTCGCAATCC ACCGCCAGCT GATCAGCCAT CGCCTCCATT GAAGCTGCCC
GAGCCGCCCA AGCCCGCCGA GAATGCAAAG CCACGCCCGC AGAAGCCGGC GCCGGCAGCC
CCCCCAAAAA CACTGAGCCA GGCGGTTCGC GAACACCTGA AGAGACTGGA TGCGGCCGGG
CAGTTTTATC CGGCCGAAGC CATTGCCCGC GGTCTGGAAG GCGATGTCCA GGTTTTGCTG
GTCCTGGACG AATCAGGCAA GGTTGTCGCC GCCCGCGTCG AGCAAAGCAG CGGCCACGCC
TTGCTTGACG ATGCCGCGCT CAAGGCCGTC CGCTCCCTGA GCAGCATTCC CGCCGACAGC
CCCCGCGACA CTTTATTGTG GTTACGCTTC CGTCTCAAAC AATAA
 
Protein sequence
MTRTDYRLFA ALALSVTLHL LPLLPYFITH PAQPESARPL QAELRNPPPA DQPSPPLKLP 
EPPKPAENAK PRPQKPAPAA PPKTLSQAVR EHLKRLDAAG QFYPAEAIAR GLEGDVQVLL
VLDESGKVVA ARVEQSSGHA LLDDAALKAV RSLSSIPADS PRDTLLWLRF RLKQ