Gene Daro_3059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3059 
Symbol 
ID3566234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3302530 
End bp3302769 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content60% 
IMG OID637681530 
Productexodeoxyribonuclease VII small subunit 
Protein accessionYP_286259 
Protein GI71908672 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value0.046824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000314592 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACCAAA CGCCCATCGC CGACATGAAA TTCGAGACGG CGCTCGCCGA ACTCGAGGAC 
ATCGTCGCCA GCATGGAAGG CGGCAAGCTT GAACTCGAAG CTTCCATCGC CGCCTACAAG
CGCGGCATGG AGCTGATGAA GCACTGCCAG AACCAGCTCG CCGATGCCGA AGCGCAGATT
CGCGTGCTCG AAAACGGCCA GTTCAAGGAT GTCGACCGCA GCACTCTGGA GGCCCAGTGA
 
Protein sequence
MDQTPIADMK FETALAELED IVASMEGGKL ELEASIAAYK RGMELMKHCQ NQLADAEAQI 
RVLENGQFKD VDRSTLEAQ