| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3052 |
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| Symbol | |
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| ID | 3566227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3296565 |
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| End bp | 3298136 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637681523 |
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| Product | GGDEF |
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| Protein accession | YP_286252 |
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| Protein GI | 71908665 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 0.927179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0159246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCAC TTCGCTACCG CCCCACCCTG CTTGCGCTGA TGAGCGCCTG GCTGGGAGTC
ATTGCATTCG CAACCCACCT CCTGCTCTCG GCCGAAATCG GGCGCTGGGA GCGTAATTTC
GATTCGGAAA TTCTGCGCCT GAGCAGCGAA GTCAAAAACA AGCTGGACAT GAATGAAGCC
GTCCTGTCGG GCTTTGCTGC CTTTCTGCAA GCGGTCGAAC GCAACGACAT GGCCTCGGCC
ACCCGGTATG CGGCTTCAGC AATGGCCTCC TACCCGCACA TCTACATGCT GGAGGTGGCG
CGCCAGGTCC CACTCGCCGA GCAAGCTGAA TTCCAGTCCA CCTTGCGCCG GGAATGGCTG
CCCAGTTTTA CGCTGAAGGA TTTTCCGACA ATCACCCAGC GGCCCTCCCA AAAGCTGCGC
ATGCAGAACT ACACCTGGCC AATCCTGTTC ATGTACCCAC CCTTACCTGA AGCAGAGGAG
ATTTTTGGTG TGCGACTGGA AACGGTCGAC TACCTTGGCC ATTCCTTGGC GCTGGCCCAC
AAAAGTTCAC GACCGGTCGC TTCTCCGATT TTCAAGATGT TCGAGGGAGG AAGCGCCTAC
ATATTGCTCA AGGAAGTTGA CCGCTCTGAA CAAGCGTCCA GCTCGGCCGG GCAAAGCTTG
TTCGGGAATA CCATGACTGC ACTACTGCTT ATCAAGACCG AGTCCATGCT CCCCGGCAAA
GGCCTCGCGC ACGATGTGGC GACGCTTGCT TACCTGGCAT CGATGACTTC CGATACCAAT
CCTGGGAGCA CGTTGTTCGC CAGACATGCT GAAGCCACTG GAACATTGGA CGAATTCTTC
TTGCCACGCT TCAACCGCCA AATACTGATC GATAACGCCT CGCAACCAAC GCTCATACAG
TTCGAACAAC AGTTACGTTG GCGCGATCTA CTGACGAGAG AGCTTGTCAC CATCTTTGCA
CTGCTGGCCT GCGCCCTGGT CAGCATTCCC ACGCTCACCC TTCGTCACTA CAAGGCACTG
GAACGCGGCG TCCGTGAACA TGAACGATCG GCCTACCTGG CAACGCACGA TCTGCTGACC
GGGCTACCGA ACCGTTTCCT GTTCCTTGAT CGCTTTGAGC AGGCCGTCCA GCAACATGTG
CGAAACGCCA ATTCATTTGC GTTACTCCTA ATCGATCTTG ATCACTTCAA GGAGATCAAC
GACAGCTACG GCCACGAGGT CGGCGACGAG GTATTGGTCG AAACCGCAAA ACGCATGACG
GCCGAGATTC GGGCGTGCGA TACGGTGGCC CGCCATGGTG GTGATGAATT CGTGATCCTT
CTGGCCAATA CGCTTAACGT CGACGATGCA CAAACAGTTG GCGAGAAGCT GCTGGCAGCA
ATTTCGACAC CGATGAAGAC CAGCGCGGGG CAGTTGCGAC TCACCGGCAG CATCGGTGTC
GCCATATACC CAGAGCATGG CACGAGCCTC GATGCAATAC GTCGAGCCGC CGACCAGGCC
ATGTATCAAG CGAAGAAAAT GGGGCGGAAC ATGGTGTCAA CGCCGGGCGG CGACCCGGCA
ACACTGTCGT AG
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| Protein sequence | MPSLRYRPTL LALMSAWLGV IAFATHLLLS AEIGRWERNF DSEILRLSSE VKNKLDMNEA
VLSGFAAFLQ AVERNDMASA TRYAASAMAS YPHIYMLEVA RQVPLAEQAE FQSTLRREWL
PSFTLKDFPT ITQRPSQKLR MQNYTWPILF MYPPLPEAEE IFGVRLETVD YLGHSLALAH
KSSRPVASPI FKMFEGGSAY ILLKEVDRSE QASSSAGQSL FGNTMTALLL IKTESMLPGK
GLAHDVATLA YLASMTSDTN PGSTLFARHA EATGTLDEFF LPRFNRQILI DNASQPTLIQ
FEQQLRWRDL LTRELVTIFA LLACALVSIP TLTLRHYKAL ERGVREHERS AYLATHDLLT
GLPNRFLFLD RFEQAVQQHV RNANSFALLL IDLDHFKEIN DSYGHEVGDE VLVETAKRMT
AEIRACDTVA RHGGDEFVIL LANTLNVDDA QTVGEKLLAA ISTPMKTSAG QLRLTGSIGV
AIYPEHGTSL DAIRRAADQA MYQAKKMGRN MVSTPGGDPA TLS
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