| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3038 |
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| Symbol | |
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| ID | 3568242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3283367 |
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| End bp | 3284365 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637681509 |
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| Product | hypothetical protein |
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| Protein accession | YP_286238 |
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| Protein GI | 71908651 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 0.0541316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.15459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTGC ATAAGCGCAG TGTCAAACTT GATCAGAAAG GCTTTGGTCT GGTCGAATTG
ATGGTTGCTT TGGTGGTTGG TCTGGTAACC AGTCTGGCCA TCATGGAGGT GTTTGTTGGC
TTCGAAGGCC AGAAGCGTAC GACCACGGCC GGCGCTGATG CGCAAACCAA CGGTACGGTG
GCGCTCTATT CGATCACGCG TGACCTGCAG ATGGCTGGTT ACGGGCTGAT ACCGGAAAAG
GACTCTCCGC TCGAATGCAA TCCAGTGCCA ACGCTTGACG GCATCAATTT ATTGCCAGTT
CGTATTGCCA ATGGTGGTAG TGGTGCAGGG GGGGATAGTA TCGCTATCCG CTTCGGTCGC
TCTCCGATGG CTGGCGTGCC GACAACTGTG GTTGGTGTGA CTGTCGCAAC AAATACGTTG
ACGGTGGATA ACAATCTGGG GTGTCAGGTT GGGGATGCAG CCCTTTTTAT AAATGGGGCT
GTATGCAAGA TGGCTCACGT GACCGGAGTG AGTGCCGCTC CCACATTTAC GGGGGTAACC
TTGGATGCGG TTGCCGCGAC TGACGTTGGA TCTAAACTTT CTTGCCTTGG CCCATGGCAA
CAGTTCGCTT ACGACGTAAC GGCTGGAAAT TTGCGAGTAA ATGCTGATCC ACGAGTTTCG
GGTATCTTCT CGATTCAGGC GCAATATGGC ATTTCCAATG CTTCCAGTGA TAACCAGGTG
GCATGTTGGA CCGATGCGGT CGCCGGCGGT TGTGGCGGTG CTGATTGGAG TAACTTAGCC
AGTCTTGCGC CTACGGTAAG AAATCGTATC AAAGCGGTGC GTATCGCCAT CATTGCACGG
AGCGAGTTGC GGGAAAGGGA TCCCGTTAGT GGGGATTTTG ATGCTTGGAC GGGCGGTCCG
GCGGTCACCA TTGCCGGTGA AGACAGGTTC TACCGCTATC GTGTGTTCGA AACCATTATT
CCATTGCGCA ATACCGTTTG GGCCAAGGAG ACGTTATGA
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| Protein sequence | MGLHKRSVKL DQKGFGLVEL MVALVVGLVT SLAIMEVFVG FEGQKRTTTA GADAQTNGTV
ALYSITRDLQ MAGYGLIPEK DSPLECNPVP TLDGINLLPV RIANGGSGAG GDSIAIRFGR
SPMAGVPTTV VGVTVATNTL TVDNNLGCQV GDAALFINGA VCKMAHVTGV SAAPTFTGVT
LDAVAATDVG SKLSCLGPWQ QFAYDVTAGN LRVNADPRVS GIFSIQAQYG ISNASSDNQV
ACWTDAVAGG CGGADWSNLA SLAPTVRNRI KAVRIAIIAR SELRERDPVS GDFDAWTGGP
AVTIAGEDRF YRYRVFETII PLRNTVWAKE TL
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