| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2962 |
|---|
| Symbol | |
|---|
| ID | 3566019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 3201569 |
|---|
| End bp | 3202087 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637681431 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_286162 |
|---|
| Protein GI | 71908575 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 0.419394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.652284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAGC CCGCCCTGAT CGTCATCGAC CTGCAGAACG ACTATTTCCC GGATGGCCGG
TTTCCGCTGT GGAATGCCGA AGGCACGCTG GCCAACGTCG AGCAGGCCAT TGGCAACGCT
CGGGCCAAGG GCATCCCGGT CATTCTGGTT CAGCACGTTG CCGACAGCAG CAAAGGGGTG
GCGCCGTTCT TCAACACCGG CACGCCGGGC GTCGACATCC ATCCGCGCAT CCTCGCCGCT
GCACCGGATG CGCCTATCGT CATCAAGTCA TTTGCCGACA GCTTCCACAA CACCACCCTG
GAAGCGACGC TGGCTCAACT CGGCGCAGAC GAACTGCTGG TCTGCGGCAT GATGACCCAG
AACTGTGTGA CCCATACCGC CATTTCCAAG GCGGCCGACA CGTACAAGGT CAGCATCGTG
GCTGACTGCT GCACGACCGT CAGCGAAATC CTGCACAAGA TCGCGTTGAA TGCCGTATCG
ACCCGGCTGA CCGTCGGCCT GGCCGCCGAC CTGCTCTAG
|
|---|
| Protein sequence | MSQPALIVID LQNDYFPDGR FPLWNAEGTL ANVEQAIGNA RAKGIPVILV QHVADSSKGV
APFFNTGTPG VDIHPRILAA APDAPIVIKS FADSFHNTTL EATLAQLGAD ELLVCGMMTQ
NCVTHTAISK AADTYKVSIV ADCCTTVSEI LHKIALNAVS TRLTVGLAAD LL
|
|---|
| |