Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2935 |
Symbol | fumC |
ID | 3566203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 3164792 |
End bp | 3166198 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637681404 |
Product | fumarate hydratase |
Protein accession | YP_286135 |
Protein GI | 71908548 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 0.317569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCTG GTGCTCGGAC CCGCTTGGAA AACGACTCAT TCGGCAGCAT CAAGGTCGCC GCCGAACGGC TCTGGGGTGC GCAAACGCAA CGGGCGCTGG AAAATTTTGC GATTTCGTCA GAGCGCATGC CGAGCGAACT GATCCATGCC CTAGCCACGA TCAAGGCCGC CTGCGCCAGC GTCAATCGGG AACTCGGCCT GATGAAGCCA GCCCTAGCGG CAGCCATTGT CATTGCGGCC AACGAAGTCG CCAGCGGCCG CCATGACGAC GAATTCGTGC TGCCGGTTTG GCAGACCGGT TCCGGCACGC AAACCAACAT GAACATGAAC GAGGTGCTGG CCAACCGCGC ATCAGAACTG CTCAATGGCC CGCGCGGCAA CGCCCGCCTC GTTCACCCCA ACGACGAGGT CAATCTCGGC CAGTCATCCA ACGACATTTT TCCGACGGCC ATGCATGTCG CAGCGGCTAC CGCCATCACC AGACAACTGT TGCCGGCCAT CCAGCAACTG ACTGCAACGC TGGAAGAAAA AACAGCCGAA TTCGCTGACA TCATCAAGAT CGGTCGCACC CATCTGCAAG ACGCCACTCC GCTATCGCTG GGCCAGGAAT TTTCGGCGTA TGTAGCCCAA CTGCAGCATG CCGAAACCTT GATCAGCGCC AGCCTGTGTT CGCTCTTTCC GCTGGCCGTG GGAGGAACGG CCGTCGGCAC CGGCTTGAAC ACGCATCGTG AATTCGGCAG TCGAGTCGCC GCCGAGCTTG CCATCCGCAC CGGCCAGCCT TTCACCAGCG CCGCCAACAA GTTCGCCGCG CTGGCCGCGC ATGATGCCCT GGTGGCCGCC CACGGTGCCC TGAAAACCCT GGCCGTGGCC CTGATCAAAA TGGCCAATGA CATTCGCTGG CTAGGTTCAG GCCCCCGCTC GGGCTTGGGC GAAATCAGGC TGCCGGAAAA CGAACCGGGT AGCTCCATCA TGCCAGGCAA GGTCAACCCG ACCCAGTGCG AGGCGCTGAC CATGCTCTGC TGCCAGGTGA TGGGCAACGA TGTGACGATC GGCATCGCCG GCGCCTCCGG CAATTTCGAA CTGAACGTCT ACAAACCGGT GATTGCCCAC AATTTCCTGC AGAGCGTACG CCTGCTGGCT GACGGCATGC TCAGTTTCGA ACGCCACTGC CTGCGCGGCA TCACAGCCAA CAAGGAACGC ATTGCCGATC TGATGGAAGG CTCACTGATG CTGGTCACCG CGCTGACCCC GCACATCGGC TACGACAATG CGGCTGAAAT CGCCAAACTG GCACACCGTC AGGGAATGAC ACTGAAGCAG GCAGCACTGG CCCTCGGTCA TGTCTCGGCA ACGGACTACG ACCGCTGGGT CGTGCCGGCC GACATGATTC ATCCGGGAAG GCCCTAA
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Protein sequence | MEAGARTRLE NDSFGSIKVA AERLWGAQTQ RALENFAISS ERMPSELIHA LATIKAACAS VNRELGLMKP ALAAAIVIAA NEVASGRHDD EFVLPVWQTG SGTQTNMNMN EVLANRASEL LNGPRGNARL VHPNDEVNLG QSSNDIFPTA MHVAAATAIT RQLLPAIQQL TATLEEKTAE FADIIKIGRT HLQDATPLSL GQEFSAYVAQ LQHAETLISA SLCSLFPLAV GGTAVGTGLN THREFGSRVA AELAIRTGQP FTSAANKFAA LAAHDALVAA HGALKTLAVA LIKMANDIRW LGSGPRSGLG EIRLPENEPG SSIMPGKVNP TQCEALTMLC CQVMGNDVTI GIAGASGNFE LNVYKPVIAH NFLQSVRLLA DGMLSFERHC LRGITANKER IADLMEGSLM LVTALTPHIG YDNAAEIAKL AHRQGMTLKQ AALALGHVSA TDYDRWVVPA DMIHPGRP
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