Gene Daro_2935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2935 
SymbolfumC 
ID3566203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3164792 
End bp3166198 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content61% 
IMG OID637681404 
Productfumarate hydratase 
Protein accessionYP_286135 
Protein GI71908548 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.317569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTG GTGCTCGGAC CCGCTTGGAA AACGACTCAT TCGGCAGCAT CAAGGTCGCC 
GCCGAACGGC TCTGGGGTGC GCAAACGCAA CGGGCGCTGG AAAATTTTGC GATTTCGTCA
GAGCGCATGC CGAGCGAACT GATCCATGCC CTAGCCACGA TCAAGGCCGC CTGCGCCAGC
GTCAATCGGG AACTCGGCCT GATGAAGCCA GCCCTAGCGG CAGCCATTGT CATTGCGGCC
AACGAAGTCG CCAGCGGCCG CCATGACGAC GAATTCGTGC TGCCGGTTTG GCAGACCGGT
TCCGGCACGC AAACCAACAT GAACATGAAC GAGGTGCTGG CCAACCGCGC ATCAGAACTG
CTCAATGGCC CGCGCGGCAA CGCCCGCCTC GTTCACCCCA ACGACGAGGT CAATCTCGGC
CAGTCATCCA ACGACATTTT TCCGACGGCC ATGCATGTCG CAGCGGCTAC CGCCATCACC
AGACAACTGT TGCCGGCCAT CCAGCAACTG ACTGCAACGC TGGAAGAAAA AACAGCCGAA
TTCGCTGACA TCATCAAGAT CGGTCGCACC CATCTGCAAG ACGCCACTCC GCTATCGCTG
GGCCAGGAAT TTTCGGCGTA TGTAGCCCAA CTGCAGCATG CCGAAACCTT GATCAGCGCC
AGCCTGTGTT CGCTCTTTCC GCTGGCCGTG GGAGGAACGG CCGTCGGCAC CGGCTTGAAC
ACGCATCGTG AATTCGGCAG TCGAGTCGCC GCCGAGCTTG CCATCCGCAC CGGCCAGCCT
TTCACCAGCG CCGCCAACAA GTTCGCCGCG CTGGCCGCGC ATGATGCCCT GGTGGCCGCC
CACGGTGCCC TGAAAACCCT GGCCGTGGCC CTGATCAAAA TGGCCAATGA CATTCGCTGG
CTAGGTTCAG GCCCCCGCTC GGGCTTGGGC GAAATCAGGC TGCCGGAAAA CGAACCGGGT
AGCTCCATCA TGCCAGGCAA GGTCAACCCG ACCCAGTGCG AGGCGCTGAC CATGCTCTGC
TGCCAGGTGA TGGGCAACGA TGTGACGATC GGCATCGCCG GCGCCTCCGG CAATTTCGAA
CTGAACGTCT ACAAACCGGT GATTGCCCAC AATTTCCTGC AGAGCGTACG CCTGCTGGCT
GACGGCATGC TCAGTTTCGA ACGCCACTGC CTGCGCGGCA TCACAGCCAA CAAGGAACGC
ATTGCCGATC TGATGGAAGG CTCACTGATG CTGGTCACCG CGCTGACCCC GCACATCGGC
TACGACAATG CGGCTGAAAT CGCCAAACTG GCACACCGTC AGGGAATGAC ACTGAAGCAG
GCAGCACTGG CCCTCGGTCA TGTCTCGGCA ACGGACTACG ACCGCTGGGT CGTGCCGGCC
GACATGATTC ATCCGGGAAG GCCCTAA
 
Protein sequence
MEAGARTRLE NDSFGSIKVA AERLWGAQTQ RALENFAISS ERMPSELIHA LATIKAACAS 
VNRELGLMKP ALAAAIVIAA NEVASGRHDD EFVLPVWQTG SGTQTNMNMN EVLANRASEL
LNGPRGNARL VHPNDEVNLG QSSNDIFPTA MHVAAATAIT RQLLPAIQQL TATLEEKTAE
FADIIKIGRT HLQDATPLSL GQEFSAYVAQ LQHAETLISA SLCSLFPLAV GGTAVGTGLN
THREFGSRVA AELAIRTGQP FTSAANKFAA LAAHDALVAA HGALKTLAVA LIKMANDIRW
LGSGPRSGLG EIRLPENEPG SSIMPGKVNP TQCEALTMLC CQVMGNDVTI GIAGASGNFE
LNVYKPVIAH NFLQSVRLLA DGMLSFERHC LRGITANKER IADLMEGSLM LVTALTPHIG
YDNAAEIAKL AHRQGMTLKQ AALALGHVSA TDYDRWVVPA DMIHPGRP