| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2790 |
|---|
| Symbol | |
|---|
| ID | 3566735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2998457 |
|---|
| End bp | 2999131 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637681259 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_285990 |
|---|
| Protein GI | 71908403 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3471] Predicted periplasmic/secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGGC TCGTGACCGC CTTGCTGGCG GGGTGTTTCG CCGCTGCCAG CGCCCAGGCC
GGCGCGCTGG TCGACCTTTC CGCCGAGGCC AGCCGACTGG CGGCGAACGA CATGGTGCGG
GCCAGCGTGT TCAGCGAAGT CAGCGGCAAT AACCCAGCCG AACTGGCGCG CCGCGTCAAT
GCCGATATAG CCGAGGCCCT GAAGCTCATT CGGGCGAAAG CTGGCGTTAC CGTCAAGAGC
GGTAATCAAT CGACTTACCC GGTCTACGGG CCGGCCCAGA AAATCGATGG CTGGCGCATG
CGCAGCGAGC TGCTGATCGA ATCGAAAGAC CTGGGGGCGG TATCGGAACT GCTCGGCAAG
CTGCAGCAGA TGCGTTTGGC GGTCGGTGCG GTCAATCAAC TGCCATCGCC GGAAACGCGA
CGTCAGGTCG AAGACGAAAC GACGCGCGAA GCGATTCGCG CCTTCCAGAG CCGTGCCGCC
GTGGTCGGTG AGCAACTGGG CAAGACCTGG AAGATCAAGC AGCTCAACAT CCAGCAGGGC
GGTGGCATGC CGGTGCCGAT GATGCGCGCC AGCCGGGGCG TGATGTTGGC CGCCGATGCG
GCCCCGGCCC CGCTGGAGGC CGGGGAAAGC CTGCTGACGA CCAATATCAG CGGGCAGATC
GAACTGGCCG ACTGA
|
|---|
| Protein sequence | MSRLVTALLA GCFAAASAQA GALVDLSAEA SRLAANDMVR ASVFSEVSGN NPAELARRVN
ADIAEALKLI RAKAGVTVKS GNQSTYPVYG PAQKIDGWRM RSELLIESKD LGAVSELLGK
LQQMRLAVGA VNQLPSPETR RQVEDETTRE AIRAFQSRAA VVGEQLGKTW KIKQLNIQQG
GGMPVPMMRA SRGVMLAADA APAPLEAGES LLTTNISGQI ELAD
|
|---|
| |