| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2785 |
|---|
| Symbol | |
|---|
| ID | 3566730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 2988864 |
|---|
| End bp | 2990996 |
|---|
| Gene Length | 2133 bp |
|---|
| Protein Length | 710 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637681254 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_285985 |
|---|
| Protein GI | 71908398 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 4.99654e-18 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAG CGACTTTGTG GATCGCCATG CTGGCGGCCT TCAGCCCCAG CAGTCATGCG
ACAGGGGATA GTCTCGACGA ACTGGGTCTG GAAGACCTCG TCAAGACCGA GGTGACCTCT
GTGTCACGCA AGAGCCAGAG CCTGAGCGAT GTCGCTGCCG CAGCTTTCGT CATATCCTCC
GAAGACATTC GTCGCTCCGG CGCTCAGGCC CTGCCTGACG TGTTGCGCAT GGCACCTGGC
ATCGAAGTGG CCCAGATCGA CAACGGGCGC TATGCCGTAA CCGCTCGCGG CTTCAACGGT
CGCTTTGCCA ACAAACTGCA AGTACTGATC GACGGCCGCA GCATCTATCA CCCGATGTTC
TCGGGGGTCC TGTGGGAACT CGATCCCATC CCGCTCGAAG ACATCGAACG TATCGAAATC
ATTCGCGGTG CCGGTGCCGT GATGTGGGGG GCCAATGCAG TTAACGGCGT GATCAACATC
ATCAGCAAGC ACAGCCGGAA CCAGACCGGA GGCGCGGCCA ATGTGACCGT CGGCTCGCAG
GGCTACGGCA ATGTCTACGC CCGTATCGGC CAGTCGCTCG ACGTAAAAAC GAGTTTCAAG
CTTTCCGTTC AAGGCCGCTA CGCCGAGCCT TCGAAGCAAT TCGACAGCCG CGACGATGCC
GAGGATCGAC TGAAGAATGG CGTTGTCGAT TTCCGTTTCG ACCGCGACCT TGGGGCGGGC
AGCGATCTGG CCATCTGGGC CAATGCCTCC CGCTCGTCGC TGGGTGACCT GTGGCAGATC
AAGCCTGAAA ATATCGGCGG GAGCATTGCA CTTAGCCCAA TGAGTTTCAT GCAACGCTTG
CATAGCGAAA CACTGGTCGG TCGCTACCGC TGGCTCAGCG ACATCGGCAT CGAATCTTCG
CTGCAGCTTT CCGGCAGCAG GTCTGGGATA GAAATCACCG ACTTCATCGA CGAATCACGC
ACCACCTTCG ACCTCGACTA TCTTGGGCGC TACGCCATTG GCACTCATGA CGTTCAGTGG
GGCCTTGGTC TCAGAAATTC ATCTGACGAC GTCTCCGCCA CCGGGAGTTA CCTCCAGATC
CAGAATCCCA GCTTCATCCA TCGCACCAGC GGCATTTTCG TGCAGGACGA TTGGACGCTG
ATTCCTGAAT CCCTCAAGCT CGGACTCGGC ATGCGCTGGG ACAAAGCCAC GCGCAACGAC
AGTAGTTATT CGCCCCATGC CACCTTGCTG TGGACGCCGT CGCAGATGGA TAGCGTCTGG
CTGAAATACG CCCGCGCACC ACGTACCGCT GCACGTGCGG AACAAGACGT CTCCATCCTG
GCTGGATTAA CCGTTCAACA GACGCAGTTC GGCAATCTGC CTATCGTTCA ATATGCACGC
CCTAGTGCTC AGGGCCTGAA TGCGGAAAAA GCCGAGGGTC TCGAACTCGG CTATCGCAAG
CAATTTTCAA ACACCGTCAG TGCAGACATG ACGGCCTATC GCTACCGCTA CACCAAACTG
CGCAGCGGCA GCCAGTCGGG CTTGATTGGT TGCAACAATG CCTTTCTCTT TGTTCCCATT
CCCGGAATGC AGGTTGATCC AGCCCGCTGC CCAGGCATTC TCTCCGGCCA GATGGTTCTG
CTGCAGGAAA TTCAGGCAGT CAACGGACTC GCCGGCTGGA GTACTGGCTT GGAACTGGCG
GCAGATTGGC TGGTGACACC AAACTGGCGA CTGCAGTTGT CCTATAGCTG GAGCAAGCTC
AACATGGACG AAGGCAAAGA CCAGATTTCC AACGCCGATG CTGAGATGAC CCAACGCGCC
AAGCCGCGGG AGAGTGCTTC ACTGCGTTCG CAGTGGAACA TGACCACCAG CCAGCAACTC
GATCTCTGGT TGCGCGCCAT GTCCAGTTAC GAACGGGTGA ACATTACCGA TGCGACACCA
AGCGCCTCAA GCGAACCGAA TTATGTACGC ATTCCCGGCT ATGTCACGCT TGACCTGCGC
TACGGTTACC GCATCAACAA AGACCTGGAA GTCGCCGTGA TCGGCCGCAA CCTGATCGGC
GCCCGTCGTT TCGAATATCT GTCCGACTAC ATTCCGACGA TCGCCAACGA AATCAAGCCA
TCAGTCATGT TTACCACTCG CTGGAAGTTC TGA
|
|---|
| Protein sequence | MKRATLWIAM LAAFSPSSHA TGDSLDELGL EDLVKTEVTS VSRKSQSLSD VAAAAFVISS
EDIRRSGAQA LPDVLRMAPG IEVAQIDNGR YAVTARGFNG RFANKLQVLI DGRSIYHPMF
SGVLWELDPI PLEDIERIEI IRGAGAVMWG ANAVNGVINI ISKHSRNQTG GAANVTVGSQ
GYGNVYARIG QSLDVKTSFK LSVQGRYAEP SKQFDSRDDA EDRLKNGVVD FRFDRDLGAG
SDLAIWANAS RSSLGDLWQI KPENIGGSIA LSPMSFMQRL HSETLVGRYR WLSDIGIESS
LQLSGSRSGI EITDFIDESR TTFDLDYLGR YAIGTHDVQW GLGLRNSSDD VSATGSYLQI
QNPSFIHRTS GIFVQDDWTL IPESLKLGLG MRWDKATRND SSYSPHATLL WTPSQMDSVW
LKYARAPRTA ARAEQDVSIL AGLTVQQTQF GNLPIVQYAR PSAQGLNAEK AEGLELGYRK
QFSNTVSADM TAYRYRYTKL RSGSQSGLIG CNNAFLFVPI PGMQVDPARC PGILSGQMVL
LQEIQAVNGL AGWSTGLELA ADWLVTPNWR LQLSYSWSKL NMDEGKDQIS NADAEMTQRA
KPRESASLRS QWNMTTSQQL DLWLRAMSSY ERVNITDATP SASSEPNYVR IPGYVTLDLR
YGYRINKDLE VAVIGRNLIG ARRFEYLSDY IPTIANEIKP SVMFTTRWKF
|
|---|
| |