Gene Daro_2773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2773 
Symbol 
ID3566770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2972970 
End bp2973758 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID637681241 
Producthydratase/decarboxylase 
Protein accessionYP_285973 
Protein GI71908386 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID[TIGR03218] 4-oxalocrotonate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.000493793 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCA ATCAACAAAC CATAGCCCAA CTGGCCGAGC ACCTCGAAAA CGCCGAGTTG 
CAGGCCCACG AAGTGATCAA GATCACCGAA GCGCATCCCG ACATGGACTG GGATGATGCC
TACGCCATCC AGTACGAAAT CCTGCGCCGC AAGCTGGCCC GCGGCGCCAA GGTCGTCGGC
CTGAAAGCCG GCCTGACCTC GCACGGCAAG ATGAAGCAGA TGGGGGTCAG CACCCCGGTT
TTCGGCTGGC TGGTCGATTA TTTCTCGGTG CCGGATGGTG GCGAGATCAA GCACAGCGAG
CTGATCCATC CCAAGGTCGA GCCGGAAATC GTCTTCGTGA CCAAGAAGGC GCTCAAGGGG
CCGGGCTGCC ATATCGGCGG CGTGTTGGCC GCGACCGACT TCGTGATGCC CGGCATCGAG
ATCATCGACT CCCGCTACAA GGACTTCAAG TTCGACCTGA AGAGCGTGAT CGCCGATAAC
TGCTCGTCGA CCCGCTTCGT GCTGGGCGGC CAGGCCACCC CGGTGGCCGG CCTCGACCTG
CGCACGTTGG GCGTGGTCAT GGAAAAGAAC GGCGAGCCGG TCGCCATCGG TGCCGGTGCT
GCGGTGCTCG GTCACCCGGC GGCGGCCATC GCGGCGCTGG CCAACCACCT CGGCGCGCGC
GGCGAGGAAA TTCCGGCCGG CACGATGATC CTCTCCGGCG GCGTCACCGA AGCCATCGCC
GTCGCTCCTG GCGACCACGT GACGCTGCGC ATCCAGTCGC TGGGAACCGT CAGCACCCGT
TTCATCTAG
 
Protein sequence
MNLNQQTIAQ LAEHLENAEL QAHEVIKITE AHPDMDWDDA YAIQYEILRR KLARGAKVVG 
LKAGLTSHGK MKQMGVSTPV FGWLVDYFSV PDGGEIKHSE LIHPKVEPEI VFVTKKALKG
PGCHIGGVLA ATDFVMPGIE IIDSRYKDFK FDLKSVIADN CSSTRFVLGG QATPVAGLDL
RTLGVVMEKN GEPVAIGAGA AVLGHPAAAI AALANHLGAR GEEIPAGTMI LSGGVTEAIA
VAPGDHVTLR IQSLGTVSTR FI