Gene Daro_2772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2772 
Symbol 
ID3566769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2971681 
End bp2972853 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content62% 
IMG OID637681240 
Productextracellular ligand-binding receptor 
Protein accessionYP_285972 
Protein GI71908385 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.000645997 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA CGTTCAAGCA CATCCGCAAC ATTGCACTTG CCACCGCCTT TGCCGCCGCC 
GGTCTGTCCG GCGCGCAGGC GGCCGACAAG GTCAAGGTCG GCTTCATGCT GCCTTACACC
GGCACCTACG CCTCGCTGGG CAACGCCATC ACCAACGGTT TCAAGCAGTA TGTCGCCGAA
AACGGCGGCA AGCTGGGCGG CCGCGAGATC GAGTACTACA CCGTCGATGA CGAATCCGAT
CCGGCCAAGG CGACTGAAAA CGCCAACAAG CTGGTCAAGC GCGACAAGGT CGATCTGCTG
GTTGGCACCG TGCACTCCGG CGTCGCCCTG GCCATGGCCA AGGTCGCCCG CGAGAACAAG
ACCCTGTTGA TCGTGCCGAA TGCCGGCGCT GATGAAATCA CTGGCCCGCT CTGCGCCCCG
AACGTCTTCC GTTCCTCCTT CTCGGCCTGG CAACCGTCCT ACGCCATGGG CGAAGTGATG
GCCAAGAAGG GGTTGAAGAA GGTCGTCACC GTGACCTGGA AATACTCCTT TGGCCTGCAG
TCGGTCGAAG GCTTCAAGGA AGCCTTCGTG AAGGCCGGTG GCAAGGTTGA AAAGGACATG
ACGCTGCCCT TCCCGAACGT CGAGTTCCAG CCCTTCCTGA CCGAAATCGC TTCGATCAAG
CCCGACGCCG TCTTCGTTTT CTTCGCCGGC GCCGGTGCTG CCAAGTTCGT CAAGGATTAC
GCCGCGGCCG GTCTGAACAA GACCATCCCG CTGTACGGCC CGGGCTTCCT GACTGATGGC
AACCTCGATG CGATGGGCGA TGCCGGCAAG GGCCTGCAGA CTACCCTGCA TTACGCCGAC
GGCCTGGATA ACAAGAAGGA TGCCGCTTTC CGCCTCGGTT ACGTCAAGGC TTACAAGATG
CAGCCGGACG TGTACGCCGT ACAGGGCTAT GACGCCGCCC AGCTTTACCA GGCCGGCCTC
AACGCGGCCG GTGGCGATGC TGCCAAGCAG GATGCCGTGA TCAAGGGGAT GGAAGCCGCC
CGGATCGACA GCCCGCGTGG CGCCTTCACG CTGTCCAAGG CCCACAACCC GGTGCAGGAC
ATCTACCTGC GTGAAGTGCA GGGGGGGCAG AACAAGGTGA TCAGCACGGC CGTCAAGAGC
CTGGCAGACC CCGCCCGCGG CTGCAAGATG TAA
 
Protein sequence
MTTTFKHIRN IALATAFAAA GLSGAQAADK VKVGFMLPYT GTYASLGNAI TNGFKQYVAE 
NGGKLGGREI EYYTVDDESD PAKATENANK LVKRDKVDLL VGTVHSGVAL AMAKVARENK
TLLIVPNAGA DEITGPLCAP NVFRSSFSAW QPSYAMGEVM AKKGLKKVVT VTWKYSFGLQ
SVEGFKEAFV KAGGKVEKDM TLPFPNVEFQ PFLTEIASIK PDAVFVFFAG AGAAKFVKDY
AAAGLNKTIP LYGPGFLTDG NLDAMGDAGK GLQTTLHYAD GLDNKKDAAF RLGYVKAYKM
QPDVYAVQGY DAAQLYQAGL NAAGGDAAKQ DAVIKGMEAA RIDSPRGAFT LSKAHNPVQD
IYLREVQGGQ NKVISTAVKS LADPARGCKM