Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2772 |
Symbol | |
ID | 3566769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2971681 |
End bp | 2972853 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637681240 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_285972 |
Protein GI | 71908385 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.000645997 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCA CGTTCAAGCA CATCCGCAAC ATTGCACTTG CCACCGCCTT TGCCGCCGCC GGTCTGTCCG GCGCGCAGGC GGCCGACAAG GTCAAGGTCG GCTTCATGCT GCCTTACACC GGCACCTACG CCTCGCTGGG CAACGCCATC ACCAACGGTT TCAAGCAGTA TGTCGCCGAA AACGGCGGCA AGCTGGGCGG CCGCGAGATC GAGTACTACA CCGTCGATGA CGAATCCGAT CCGGCCAAGG CGACTGAAAA CGCCAACAAG CTGGTCAAGC GCGACAAGGT CGATCTGCTG GTTGGCACCG TGCACTCCGG CGTCGCCCTG GCCATGGCCA AGGTCGCCCG CGAGAACAAG ACCCTGTTGA TCGTGCCGAA TGCCGGCGCT GATGAAATCA CTGGCCCGCT CTGCGCCCCG AACGTCTTCC GTTCCTCCTT CTCGGCCTGG CAACCGTCCT ACGCCATGGG CGAAGTGATG GCCAAGAAGG GGTTGAAGAA GGTCGTCACC GTGACCTGGA AATACTCCTT TGGCCTGCAG TCGGTCGAAG GCTTCAAGGA AGCCTTCGTG AAGGCCGGTG GCAAGGTTGA AAAGGACATG ACGCTGCCCT TCCCGAACGT CGAGTTCCAG CCCTTCCTGA CCGAAATCGC TTCGATCAAG CCCGACGCCG TCTTCGTTTT CTTCGCCGGC GCCGGTGCTG CCAAGTTCGT CAAGGATTAC GCCGCGGCCG GTCTGAACAA GACCATCCCG CTGTACGGCC CGGGCTTCCT GACTGATGGC AACCTCGATG CGATGGGCGA TGCCGGCAAG GGCCTGCAGA CTACCCTGCA TTACGCCGAC GGCCTGGATA ACAAGAAGGA TGCCGCTTTC CGCCTCGGTT ACGTCAAGGC TTACAAGATG CAGCCGGACG TGTACGCCGT ACAGGGCTAT GACGCCGCCC AGCTTTACCA GGCCGGCCTC AACGCGGCCG GTGGCGATGC TGCCAAGCAG GATGCCGTGA TCAAGGGGAT GGAAGCCGCC CGGATCGACA GCCCGCGTGG CGCCTTCACG CTGTCCAAGG CCCACAACCC GGTGCAGGAC ATCTACCTGC GTGAAGTGCA GGGGGGGCAG AACAAGGTGA TCAGCACGGC CGTCAAGAGC CTGGCAGACC CCGCCCGCGG CTGCAAGATG TAA
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Protein sequence | MTTTFKHIRN IALATAFAAA GLSGAQAADK VKVGFMLPYT GTYASLGNAI TNGFKQYVAE NGGKLGGREI EYYTVDDESD PAKATENANK LVKRDKVDLL VGTVHSGVAL AMAKVARENK TLLIVPNAGA DEITGPLCAP NVFRSSFSAW QPSYAMGEVM AKKGLKKVVT VTWKYSFGLQ SVEGFKEAFV KAGGKVEKDM TLPFPNVEFQ PFLTEIASIK PDAVFVFFAG AGAAKFVKDY AAAGLNKTIP LYGPGFLTDG NLDAMGDAGK GLQTTLHYAD GLDNKKDAAF RLGYVKAYKM QPDVYAVQGY DAAQLYQAGL NAAGGDAAKQ DAVIKGMEAA RIDSPRGAFT LSKAHNPVQD IYLREVQGGQ NKVISTAVKS LADPARGCKM
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