| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2705 |
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| Symbol | |
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| ID | 3566991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2898040 |
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| End bp | 2898849 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637681172 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_285905 |
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| Protein GI | 71908318 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.0000135521 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000104011 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGTCG ATCATTACGA AAATTTTCCA GTGGCATCAC TGCTATTGCC GCGTGCATTG
CGCCAGCCAA TCGAAGTTAT TTACCGCTTT GCCCGCAGCG CCGACGATAT TGCCGACGAG
GGCGACGCCT CATCCGATGA GCGCCTGGCC GGACTAGCTA CCTATCAGGC GGAACTGGAC
CGGATCGCCG CTGGCACAAG GCCGCAGACG CCGCTGTTCG TTGAACTGGC CAAGGTAATT
TCGGCCCACG CCCTGCCCAT CCAGTTATTC CGCGATCTGC TCGAGGCCTT CGCCCAGGAT
GTGGTCAAGA AGCGCTATGC CGACTACCCG GAACTGCTCG ATTACTGCCG CCGCTCAGCC
AATCCGGTCG GGCGGCTGGT GCTGCACCTG TTCGGTCGCA CAGAGCCGGA ACACCTGGAA
CAATCCGACT GCATCTGCAC TGCCCTTCAG TTGATCAACT TTTGGCAGGA TGTGGCGGTC
GACTGGCAAA AAGATCGAGT TTACATACCT CAGACCGACT TCCCGCATTT CCGCCTTAGC
GAAGACGATA TTGCGCACAG CCGCTGGTCG GCCAACTGGG CGGCGCTGAT GGACTTCGAA
ATGGACCGGG CGACGGCGCT GATGAAGCGC GGCGCCCCGC TCGTCCACGC TCTGCCCGGC
CGCCTCGGCT GGGAAATCCG CCTGACCATA CAGGGTGGCC TGCGCATTCT TGAACGCATC
CGGCAGGTGC GCGGTGACGT TTTCACCCGC CGCCCAAAGC TCGGCAAATG GGATTGGCTC
GTTCTGGCCG GCCGTTCCAT TAGAATGTGA
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| Protein sequence | MSVDHYENFP VASLLLPRAL RQPIEVIYRF ARSADDIADE GDASSDERLA GLATYQAELD
RIAAGTRPQT PLFVELAKVI SAHALPIQLF RDLLEAFAQD VVKKRYADYP ELLDYCRRSA
NPVGRLVLHL FGRTEPEHLE QSDCICTALQ LINFWQDVAV DWQKDRVYIP QTDFPHFRLS
EDDIAHSRWS ANWAALMDFE MDRATALMKR GAPLVHALPG RLGWEIRLTI QGGLRILERI
RQVRGDVFTR RPKLGKWDWL VLAGRSIRM
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