Gene Daro_2659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2659 
Symbol 
ID3567094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2852836 
End bp2853594 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content65% 
IMG OID637681123 
Producthypothetical protein 
Protein accessionYP_285859 
Protein GI71908272 
COG category 
COG ID 
TIGRFAM ID[TIGR02742] type-F conjugative transfer system pilin assembly protein TrbC 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.0664159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGCTA CTGACCCCCA TCGAACCCTC GCCTCCTTGA TCCTCGGGCT CAGCGCCGCA 
CTCGTTGCCG GCAGTTCGGC CCTGGCGCAG ACAACGCCGA TCGTCACCGA GGCGGACATC
GAACAAGCCC GGCGTGAGAC CCCCTCCGTC ACCGAGCAAG ATATCGAGTT GGCGCGACAG
AAGTACGCCC TGCCGAGCGA GGCCGGACAC CGACCCGCCC CGCTGAACAG CCCGAATATT
GAGGCGCTAC CCCAACCGGC GACGCCCGTG CCGGTCGACC TGGAAGCGCT GGCTCGCGGC
TATGCCGGGC AATCCGATGC GATGGTTCAG GCACAAGGGC TGACTGCCGG GCCAGGACTT
TTTATCTTCG TCAGCCTGTC CATGCCCCGC GCCACGCTGC AAGGTCTGGT CAACCAGGCG
GCTCGCGCCA AGGCCGCCAT CGTCATCCGC GGCTTCGCCA ACGGTTCCTT GCGCGCCACA
GTTACTCAGG TCCAGGGCTT GATTGGCAAA CAGCAGGTAG CAATCCAGAT CGATCCGCTG
GCCTTCGACC GCTTCGCCAT CAGCAAGGTA CCCAGCTTCG TCCTGGTGCG CGACGGCACG
CGTCCCGTTG CCTGTGCCAG CGGTAGTTGC GCGCCTGCCG ACAGTTTCCT GCGGTCAACC
GGTGACGTCA GCCTGGATTA CGCGCTGGAG CACATGCAGC GCTCGGCGCC TGCCTTTGCT
CCTGCCGCCG AACTCTTCCT GAAACGCCTC AGAGGATAG
 
Protein sequence
MSATDPHRTL ASLILGLSAA LVAGSSALAQ TTPIVTEADI EQARRETPSV TEQDIELARQ 
KYALPSEAGH RPAPLNSPNI EALPQPATPV PVDLEALARG YAGQSDAMVQ AQGLTAGPGL
FIFVSLSMPR ATLQGLVNQA ARAKAAIVIR GFANGSLRAT VTQVQGLIGK QQVAIQIDPL
AFDRFAISKV PSFVLVRDGT RPVACASGSC APADSFLRST GDVSLDYALE HMQRSAPAFA
PAAELFLKRL RG