| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2655 |
|---|
| Symbol | |
|---|
| ID | 3567147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 2850196 |
|---|
| End bp | 2850786 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637681119 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_285855 |
|---|
| Protein GI | 71908268 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
|---|
| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 0.364147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCG ATCCTCTTCA GGCCGCCCGC CCCGCAGCAA ACCCCAGACA TGGGCGTCGA
ATCCTCGGGT GGGTGGGCGA CTTCCTGTGC CACGCCCGCC AGCGCTGGTA CCTCTACCTG
CCGATCGTCG CCATCTGGAG CCTGGCCTAT GTCCGCCTCT TCGTCGACGC GACACCGCGA
GTACCGGTTC TTTTCAACTG GACACCGAGC CTGCCTTATC GCGTTGCCTG GCTGCAGCGT
GGTCTGCACC CACTGCAGCG CGGCGACTTC ATCGTCTACG CCTTTGCCGG CGAGGCGCAG
CGCCGTTATC CGGGATTACT CGGTCAGCCT TTCTTCAAGA TCGTGCGCGG TTTGCCGGGC
GATACCGTAA CCGTCACCGG CCGGCAGGTC GCCATCAACG GCCAGGACGT CGGTGTGGCC
AAGACAAAGG CCTATGACCG CAGGCCACTC GCACCGATTG CGCCGACCGT AATCCCGCCT
CGCTACTACT ACGTGCAGGG CACCAGCCCC GACTCCTTCG ACTCGCGCTA CCAGGAAAGT
GGCCTGGTCC GGGAGGAGCA GGTGATCGGC GTCGTGGTCC CGCTGTTCTG A
|
|---|
| Protein sequence | MNSDPLQAAR PAANPRHGRR ILGWVGDFLC HARQRWYLYL PIVAIWSLAY VRLFVDATPR
VPVLFNWTPS LPYRVAWLQR GLHPLQRGDF IVYAFAGEAQ RRYPGLLGQP FFKIVRGLPG
DTVTVTGRQV AINGQDVGVA KTKAYDRRPL APIAPTVIPP RYYYVQGTSP DSFDSRYQES
GLVREEQVIG VVVPLF
|
|---|
| |