Gene Daro_2498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2498 
Symbol 
ID3568047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2698059 
End bp2699327 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content54% 
IMG OID637680965 
ProductPhage integrase 
Protein accessionYP_285702 
Protein GI71908115 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATAG AGCTTATTGG CCGTGTCTGG TATGCATCTT TACTAGTCCC CAAGGATGCC 
AGGGAGGCCC TAGGTAAGGT CCGCTTCAAG CAGTCTCTCG GGACAGCCAA TAGACGAGAA
GCCATACACC TAGCCGCCCC CATCGTGTCC CACTGGAAGG CCCAGATAAA GCAAGCCAGG
GGCTCTACCA ATGCCGTGGC AAATGAGGCT CTTCGCTGGA AGCAGGCCCT CATGCAGGCC
CCTGACGAGG ACACCAAGGA AACTTGGGAG AACGTCCTAT CAGACAAGGT CGAGTCCATT
GAGCAAGCTA AGGGGTATCA AGCAGCCAAG GACTTCAGCG ACCTAGCCAC AGGTATAGCC
ACGCCCAGTA ATCAATACTT CGAAACCTGG AAAGCCCAGA TAACCTCTGT AGCCAAGACA
AAGGACCAGA TGGTTAAGGA TGTTGGGCTA CTGATTGCAG AGTTCTCCAC TCTCCAGGCA
GTCAACAAGG CAGCCGTTAG GCACTGGATA GACAAGCTCC TAGGTGACGG CAAGGGGGGC
GCATCAATAC GCCGGATTCT CTCCTTCTGC CGTCATTACT GGAGATATAT AAAGCGCTAT
GACGCTGTAG ATAAGGAGTC AGCCCCCTTC GATGGCGTCT TCGAGGCTGC CCCCAAGAAG
AAGCGCAGGA CGACCAACCT ACCTTACTCT CCTGATGATG TAGTCCAGCT ATGGAAGGCT
GCCTCTGAGC GCCCTCTAGG GACCGCAAAG AACGCCCCAA AGGATGTGCA ACTTGCCGAG
CTAATCATGC TGGGTGCCTA TACTGGGGCC CGGATTGAAG AGCTATGCTC TATCAAGATT
ACCAAGGTCA CAGGACACTC ATTCAAGGTA GAGGATGCCA AGACTGATTC AGGGTGGCGA
GAAGTCCCAA TCCATTCAGC CATCGCCCCT CTAGTAAAGC GCTTGAAGGA GTCCTCTAAG
GATGGCTATC TCATCTCGGG CCTGACCTTC AATAAGTATG AGGACAGGTC TAACGCTATC
GGCAAGCGGT TTGGCAGACT GAAGACAGCG CAGGGCTTCA CCTCCGCCCA TACCTTCCAC
TCGTTCCGCT CCACGGTGGC AACCCTCCTG GAGAATGCTG GGGTCCTTGA AGGTGTAGCT
GCTGACATCA TCGGCCACGA GAAGCCCACT ATGACCTATG GGCTGTACTC TGGAGGTGCC
GATATGGCAA CCAAGAAGGC TGCCCTGGAG AAGATCAGCT ACCCATTCCC TAAAGACGCT
CAGGAGTAA
 
Protein sequence
MNIELIGRVW YASLLVPKDA REALGKVRFK QSLGTANRRE AIHLAAPIVS HWKAQIKQAR 
GSTNAVANEA LRWKQALMQA PDEDTKETWE NVLSDKVESI EQAKGYQAAK DFSDLATGIA
TPSNQYFETW KAQITSVAKT KDQMVKDVGL LIAEFSTLQA VNKAAVRHWI DKLLGDGKGG
ASIRRILSFC RHYWRYIKRY DAVDKESAPF DGVFEAAPKK KRRTTNLPYS PDDVVQLWKA
ASERPLGTAK NAPKDVQLAE LIMLGAYTGA RIEELCSIKI TKVTGHSFKV EDAKTDSGWR
EVPIHSAIAP LVKRLKESSK DGYLISGLTF NKYEDRSNAI GKRFGRLKTA QGFTSAHTFH
SFRSTVATLL ENAGVLEGVA ADIIGHEKPT MTYGLYSGGA DMATKKAALE KISYPFPKDA
QE